Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p19570 Brassica napus
Aa31LG4G16730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis
Actinidia19077 Actinidia chinensis
Actinidia34964 Actinidia chinensis
Ah.11g046290 Amaranthus hybridus
AL5G27450 Arabidopsis lyrata
Aqoxy3G00871 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea
AT3G48120 Arabidopsis thaliana
ATR0712G004 Amborella trichopoda
ATR0753G068 Amborella trichopoda
Atru.chr9.2391 Acer truncatum
AUR62008294 Chenopodium quinoa
AUR62031056 Chenopodium quinoa
BcaB01g00844 Brassica carinata
BcaC07g39293 Brassica carinata
BcaC07g39294 Brassica carinata
BolC8t49939H Brassica oleracea
BraA06t25037Z Brassica rapa
C08p23010 Brassica napus
CAN.G1932.4 Capsicum annuum
CANSAT80G0898 Cannabis sativa
CARHR156850 Cardamine hirsuta
Carub.0005s1423 Capsella rubella
Ca_21878_v3 Cicer arietinum L.
Ca_21886_v3 Cicer arietinum L.
CBR_g6719 Chara braunii
Cc04_g16230 Coffea canephora
CDE04G3061 Ceratophyllum demersum
CDE06G0758 Ceratophyllum demersum
CDE06G1032 Ceratophyllum demersum
CDE06G2837 Ceratophyllum demersum
Cfa019059 Carpinus fangiana
Ciclev10023573m.g Citrus clementina
CiPaw.12G022600 Carya illinoinensis
ClCG01G014160 Citrullus lanatus
COL.COLO4_21450 Corchorus olitorius
Cpa.g.sc35.28 Carica papaya
CsaV3_1G008150 Cucumis sativus L.
CSS0033214 Camellia sinensis var. sinensis
CSS0042495 Camellia sinensis var. sinensis
DCAR_026101 Daucus carota
Dinv13130 Davidia involucrata
ECA246G4585 Erigeron canadensis
EL10Ac5g10849 Beta vulgaris
Eucgr.K02884 Eucalyptus grandis
FAN04G3214 Fragaria x ananassa
FAN08G1664 Fragaria x ananassa
FAN13G1045 Fragaria x ananassa
FAN18G1223 Fragaria x ananassa
FvH4_5g16290 Fragaria vesca
Glyma.05G033200 Glycine max
Glyma.17G093800 Glycine max
Gohir.A08G095200 Gossypium hirsutum
Gohir.D08G106700 Gossypium hirsutum
Gorai.004G113800 Gossypium raimondii
GSVIVG01007834001 Vitis vinifera
HanXRQChr14g0438811 Helianthus annuus
Haze_07429 Corylus avellana
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla
HPP92_021882 Vanilla planifolia
Hund02706 Selenicereus undatus
Lalb_Chr07g0182501 Lupinus albus
Lj4g0023975 Lotus japonicus
Lj5A120T53 Lonicera japonica
Lj5P120T28 Lonicera japonica
Lsat_1_v5_gn_5_18061 Lactuca sativa
Manes.06G099800 Manihot esculenta
Mapoly0207s0010 Marchantia polymorpha
MBI16_g07135_MAGBIO Magnolia biondii
MD06G1182300 Malus domestica
MD14G1188300 Malus domestica
Medtr4g106550 Medicago truncatula
MELO3C002232.2 Cucumis melo
Migut.I00099 Erythranthe guttata
MSTRG.23070 Avicennia marina
Nitab4.5_0000026g0410 Nicotiana tabacum
Nitab4.5_0003577g0010 Nicotiana tabacum
Nn2g10835 Nelumbo nucifera
Nn3g17040 Nelumbo nucifera
Nn8g38961 Nelumbo nucifera
Oeu005686.3 Olea europaea
Oeu042970.1 Olea europaea
Os01g0687600 Oryza sativa ssp. japonica
Peaxi162Scf00496g00038 Petunia axillaris
PGR044G1407 Punica granatum
Phvul.003G196400 Phaseolus vulgaris
Potri.015G070100 Populus trichocarpa
Pp3c10_4330 Physcomitrium patens
Prupe.5G180400 Prunus persica
Psat4g055720 Pisum sativum
PSO161G0080 Papaver somniferum
QL10p013685 Quercus lobata
RcHm_v2.0_Chr7g0179841 Rosa chinensis
Rhsim12G0161000 Rhododendron simsii
Sabra15G0094200 Salix brachista
Sabra15G0094500 Salix brachista
Sabra15G0095700 Salix brachista
SalBow5G4198 Salvia bowleyana
Sc04g0002180 Simmondsia chinensis
Sed0021978 Sechium edule
SEGI_22753 Sequoiadendron giganteum
SGA_v2.0_scaffold56G20079 Striga asiatica
Solyc12g027740.3 Solanum lycopersicum
Sopen12g012820 Solanum pennellii
Sp5g13910 Schrenkiella parvula
TAR374G0618 Trochodendron aralioides
THA.LOC104821469 Tarenaya hassleriana
Thecc.03G002700 Theobroma cacao
Thhalv10010547m.g Eutrema salsugineum
TPR.G38369 Trifolium pratense
unitig_749.g13457 Utricularia gibba
vmacro16583 Vaccinium macrocarpon
VMungo1215G1614 Vigna mungo
Zm00001eb156370 Zea mays

User provided reference genes

Program Settings