Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25680 Brassica napus
Aa31LG4G17160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis
Actinidia08872 Actinidia chinensis
Ah.11g044830 Amaranthus hybridus
AL1G65740 Arabidopsis lyrata
AL5G27990 Arabidopsis lyrata
Aqoxy5G03376 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea
AT3G48540 Arabidopsis thaliana
ATR0561G278 Amborella trichopoda
Atru.chr6.1794 Acer truncatum
AUR62029612 Chenopodium quinoa
AUR62034825 Chenopodium quinoa
BcaB05g23009 Brassica carinata
BcaC09g49875 Brassica carinata
BolC1t03129H Brassica oleracea
BraA01t02447Z Brassica rapa
C01p32250 Brassica napus
CAN.G352.13 Capsicum annuum
CANSAT80G0303 Cannabis sativa
CARHR157340 Cardamine hirsuta
Carub.0005s1473 Capsella rubella
Ca_26101_v3 Cicer arietinum L.
CBR_g19095 Chara braunii
Cc09_g03990 Coffea canephora
Cc09_g04000 Coffea canephora
CDE05G1358 Ceratophyllum demersum
Ciclev10032657m.g Citrus clementina
CiPaw.11G007100 Carya illinoinensis
ClCG03G003770 Citrullus lanatus
COL.COLO4_28130 Corchorus olitorius
Cpa.g.sc13.115 Carica papaya
Cre19.g750897 Chlamydomonas reinhardtii
CsaV3_1G009660 Cucumis sativus L.
CSS0042372 Camellia sinensis var. sinensis
DCAR_016389 Daucus carota
Dinv23146 Davidia involucrata
Duzib205G1898 Durio zibethinus
EL10Ac5g11412 Beta vulgaris
Eucgr.B00111 Eucalyptus grandis
FAN04G0682 Fragaria x ananassa
FAN04G3009 Fragaria x ananassa
FAN08G2924 Fragaria x ananassa
FAN13G1867 Fragaria x ananassa
FAN18G2834 Fragaria x ananassa
FvH4_5g08340 Fragaria vesca
Glyma.05G048400 Glycine max
Gohir.A12G189700 Gossypium hirsutum
Gohir.D12G192100 Gossypium hirsutum
Gorai.008G206400 Gossypium raimondii
GSVIVG01008544001 Vitis vinifera
HanXRQChr13g0408701 Helianthus annuus
Haze_07139 Corylus avellana
Haze_26466 Corylus avellana
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla
HPP92_025255 Vanilla planifolia
Hund02442 Selenicereus undatus
Lalb_Chr13g0297241 Lupinus albus
Lalb_Chr14g0365481 Lupinus albus
Lj4g0002806 Lotus japonicus
Lj5A96G46 Lonicera japonica
Lsat_1_v5_gn_1_28920 Lactuca sativa
Manes.06G119700 Manihot esculenta
MBI07_g16949_MAGBIO Magnolia biondii
MCO04G397 Micromonas commoda
MD06G1141700 Malus domestica
MD14G1156900 Malus domestica
Medtr4g057655 Medicago truncatula
Medtr4g071665 Medicago truncatula
Medtr4g103300 Medicago truncatula
MELO3C002362.2 Cucumis melo
Migut.D01965 Erythranthe guttata
MSTRG.9682 Avicennia marina
Nitab4.5_0003282g0060 Nicotiana tabacum
Nitab4.5_0004750g0020 Nicotiana tabacum
Nn4g22315 Nelumbo nucifera
Oeu036009.4 Olea europaea
Oeu040847.2 Olea europaea
Os01g0765000 Oryza sativa ssp. japonica
Peaxi162Scf00089g00627 Petunia axillaris
PGR044G0473 Punica granatum
PGSC0003DMG400015182 Solanum tuberosum
Phvul.003G211300 Phaseolus vulgaris
Potri.012G097800 Populus trichocarpa
Potri.015G096400 Populus trichocarpa
Pp3c2_32260 Physcomitrium patens
PRCOL_00002657 Prasinoderma coloniale
Prupe.5G150900 Prunus persica
Psat4g066200 Pisum sativum
PSO017G5417 Papaver somniferum
PSO478G0702 Papaver somniferum
QL10p002894 Quercus lobata
RcHm_v2.0_Chr7g0190121 Rosa chinensis
Rhsim12G0174600 Rhododendron simsii
Sabra15G0117200 Salix brachista
SalBow6G4201 Salvia bowleyana
SalBow6G4357 Salvia bowleyana
Sc04g0000170 Simmondsia chinensis
Sc04g0000640 Simmondsia chinensis
Sed0017169 Sechium edule
SEGI_22016 Sequoiadendron giganteum
SEGI_38890 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04149 Striga asiatica
SMO116G0330 Selaginella moellendorffii
SMO199G0092 Selaginella moellendorffii
SMO361G0344 Selaginella moellendorffii
Solyc03g111350.3 Solanum lycopersicum
Sopen03g030480 Solanum pennellii
Sp5g13440 Schrenkiella parvula
TAR374G0821 Trochodendron aralioides
Thecc.03G129300 Theobroma cacao
Thhalv10010696m.g Eutrema salsugineum
TPR.G19207 Trifolium pratense
TWI39G0919 Tripterygium wilfordii
unitig_46.g18474 Utricularia gibba
vmacro16718 Vaccinium macrocarpon
VMungo1215G3263 Vigna mungo
Zm00001eb370270 Zea mays

User provided reference genes

Program Settings