Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20300 Brassica napus
A09p10140 Brassica napus
Aa31LG1G14610 Aethionema arabicum
Aa31LG1G14620 Aethionema arabicum
Actinidia17422 Actinidia chinensis
Actinidia22955 Actinidia chinensis
Actinidia36756 Actinidia chinensis
Ah.03g149120 Amaranthus hybridus
AL8G45460 Arabidopsis lyrata
Aqoxy5G01815 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea
AT5G66130 Arabidopsis thaliana
ATR0712G114 Amborella trichopoda
Atru.chr3.853 Acer truncatum
AUR62003339 Chenopodium quinoa
AUR62029498 Chenopodium quinoa
BcaB04g20123 Brassica carinata
BcaC04g23114 Brassica carinata
BolC9t54092H Brassica oleracea
BraA09t36658Z Brassica rapa
C09p12020 Brassica napus
CAN.G1274.29 Capsicum annuum
CAN.G1274.30 Capsicum annuum
CANSAT25G3480 Cannabis sativa
CARHR281620 Cardamine hirsuta
Carub.0008s2836 Capsella rubella
Ca_03628_v3 Cicer arietinum L.
CBR_g51010 Chara braunii
Cc07_g11050 Coffea canephora
CDE02G3565 Ceratophyllum demersum
Cfa007000 Carpinus fangiana
Ciclev10025220m.g Citrus clementina
CiPaw.07G060900 Carya illinoinensis
ClCG01G020460 Citrullus lanatus
COL.COLO4_22460 Corchorus olitorius
Cpa.g.sc6.285 Carica papaya
Cre03.g196600 Chlamydomonas reinhardtii
CsaV3_6G047340 Cucumis sativus L.
CSS0025685 Camellia sinensis var. sinensis
DCAR_014038 Daucus carota
Dinv33663 Davidia involucrata
Dinv33664 Davidia involucrata
Dinv40115 Davidia involucrata
Duzib187G1447 Durio zibethinus
ECA246G3730 Erigeron canadensis
EL10Ac6g15524 Beta vulgaris
Eucgr.I02333 Eucalyptus grandis
FAN19G2077 Fragaria x ananassa
FAN23G1005 Fragaria x ananassa
FAN26G2549 Fragaria x ananassa
FAN28G2818 Fragaria x ananassa
FvH4_1g11470 Fragaria vesca
Glyma.16G124500 Glycine max
Gohir.A10G098700 Gossypium hirsutum
Gohir.D10G089300 Gossypium hirsutum
Gorai.011G098200 Gossypium raimondii
GSVIVG01018736001 Vitis vinifera
HanXRQChr15g0483891 Helianthus annuus
Haze_03732 Corylus avellana
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla
HPP92_022170 Vanilla planifolia
HPP92_022171 Vanilla planifolia
Hund16502 Selenicereus undatus
Hund31048 Selenicereus undatus
Hund31049 Selenicereus undatus
Hund31353 Selenicereus undatus
Hund31354 Selenicereus undatus
Lalb_Chr16g0391391 Lupinus albus
Lj2A480G48 Lonicera japonica
Lj4g0007150 Lotus japonicus
Lsat_1_v5_gn_3_72080 Lactuca sativa
Manes.01G148500 Manihot esculenta
Mapoly0004s0213 Marchantia polymorpha
MBI05_g23389_MAGBIO Magnolia biondii
MCO01G428 Micromonas commoda
MD15G1242700 Malus domestica
Medtr8g075250 Medicago truncatula
MELO3C007925.2 Cucumis melo
Migut.L00910 Erythranthe guttata
MSTRG.15581 Avicennia marina
Nitab4.5_0001892g0110 Nicotiana tabacum
Nitab4.5_0003187g0030 Nicotiana tabacum
Oeu048479.1 Olea europaea
Os03g0242100 Oryza sativa ssp. japonica
Peaxi162Scf00328g00616 Petunia axillaris
PGR119G1624 Punica granatum
PGSC0003DMG400003647 Solanum tuberosum
Phvul.003G265000 Phaseolus vulgaris
Potri.005G111000 Populus trichocarpa
Pp3c8_14180 Physcomitrium patens
PRCOL_00000425 Prasinoderma coloniale
Prupe.7G171500 Prunus persica
Psat4g101960 Pisum sativum
PSO170G3776 Papaver somniferum
PSO700G0294 Papaver somniferum
QL06p051072 Quercus lobata
RcHm_v2.0_Chr2g0099051 Rosa chinensis
Rhsim10G0209300 Rhododendron simsii
Sabra05G0091000 Salix brachista
SalBow5G1234 Salvia bowleyana
Sc16g0001970 Simmondsia chinensis
Sed0025600 Sechium edule
SEGI_14672 Sequoiadendron giganteum
SEGI_24182 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43296 Striga asiatica
SHI08537 Sapria himalayana
SMO329G0081 Selaginella moellendorffii
Solyc02g083600.4 Solanum lycopersicum
Sopen02g028380 Solanum pennellii
Sopen10g019740 Solanum pennellii
Sp2g30560 Schrenkiella parvula
TAR376G1060 Trochodendron aralioides
Thecc.01G014800 Theobroma cacao
Thhalv10003881m.g Eutrema salsugineum
TPR.G19508 Trifolium pratense
TWI53G1373 Tripterygium wilfordii
unitig_37.g12438 Utricularia gibba
vmacro22151 Vaccinium macrocarpon
vmacro22192 Vaccinium macrocarpon
VMungo0251G0646 Vigna mungo
Zm00001eb398900 Zea mays

User provided reference genes

Program Settings