Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p40680 Brassica napus
Aa31LG10G8390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis
Actinidia06260 Actinidia chinensis
Ah.10g030940 Amaranthus hybridus
AL3G18860 Arabidopsis lyrata
AL908U10010 Arabidopsis lyrata
Aqoxy2G03825 Aquilegia oxysepala
Aqoxy5G01848 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea
AT3G07530 Arabidopsis thaliana
ATR1093G023 Amborella trichopoda
Atru.chr11.2433 Acer truncatum
Atru.chr11.2434 Acer truncatum
Atru.chr11.2476 Acer truncatum
AUR62026839 Chenopodium quinoa
AUR62037214 Chenopodium quinoa
BcaC05g29545 Brassica carinata
BolC5t34633H Brassica oleracea
BraA05t22799Z Brassica rapa
C05p59790 Brassica napus
CAN.G732.14 Capsicum annuum
CANSAT78G0292 Cannabis sativa
CANSAT78G2064 Cannabis sativa
CARHR082190 Cardamine hirsuta
Carub.0003s0708 Capsella rubella
Ca_02010_v3 Cicer arietinum L.
Ca_25408_v3 Cicer arietinum L.
Ca_25460_v3 Cicer arietinum L.
Cc02_g29630 Coffea canephora
Cc07_g20890 Coffea canephora
CDE05G1491 Ceratophyllum demersum
Ciclev10033512m.g Citrus clementina
CiPaw.13G011700 Carya illinoinensis
COL.COLO4_35437 Corchorus olitorius
Cpa.g.sc96.48 Carica papaya
Cpa.g.sc96.50 Carica papaya
CsaV3_5G011280 Cucumis sativus L.
DCAR_010372 Daucus carota
DCAR_010374 Daucus carota
Dinv00935 Davidia involucrata
Dinv09252 Davidia involucrata
Duzib106G1800 Durio zibethinus
ECA248G1764 Erigeron canadensis
EL10Ac2g02834 Beta vulgaris
Eucgr.H05129 Eucalyptus grandis
Eucgr.H05132 Eucalyptus grandis
Eucgr.H05138 Eucalyptus grandis
FAN01G2130 Fragaria x ananassa
FAN03G0498 Fragaria x ananassa
FvH4_7g02620 Fragaria vesca
Glyma.11G153500 Glycine max
Gohir.A06G175900 Gossypium hirsutum
Gohir.A06G175902 Gossypium hirsutum
Gohir.D06G185500 Gossypium hirsutum
Gorai.010G217100 Gossypium raimondii
GSVIVG01000827001 Vitis vinifera
HanXRQChr02g0050141 Helianthus annuus
Haze_03062 Corylus avellana
HPP92_012099 Vanilla planifolia
Hund15718 Selenicereus undatus
Lalb_Chr25g0282291 Lupinus albus
Lj3g0026268 Lotus japonicus
Lj9C648T3 Lonicera japonica
Lsat_1_v5_gn_1_114420 Lactuca sativa
Manes.12G022900 Manihot esculenta
Mapoly0001s0524 Marchantia polymorpha
MBI13_g29518_MAGBIO Magnolia biondii
MD00G1214400 Malus domestica
MD00G1214500 Malus domestica
MD07G1035100 Malus domestica
MD07G1035200 Malus domestica
Medtr3g019010 Medicago truncatula
Medtr3g019025 Medicago truncatula
Medtr3g019030 Medicago truncatula
MELO3C016629.2 Cucumis melo
Migut.K00935 Erythranthe guttata
Nitab4.5_0000021g1060 Nicotiana tabacum
Nitab4.5_0002530g0080 Nicotiana tabacum
Nn7g37154 Nelumbo nucifera
Nn7g37167 Nelumbo nucifera
Oeu006113.1 Olea europaea
Os03g0243200 Oryza sativa ssp. japonica
Peaxi162Scf00516g00328 Petunia axillaris
PGR031G1286 Punica granatum
PGSC0003DMG400031735 Solanum tuberosum
Phvul.002G285400 Phaseolus vulgaris
Potri.004G236000 Populus trichocarpa
Pp3c9_4730 Physcomitrium patens
Prupe.2G031500 Prunus persica
Psat5g217480 Pisum sativum
Psat5g217880 Pisum sativum
PSO675G8563 Papaver somniferum
QL04p014186 Quercus lobata
RcHm_v2.0_Chr1g0321321 Rosa chinensis
Rhsim07G0065000 Rhododendron simsii
Sabra01G0180400 Salix brachista
Sc11g0006630 Simmondsia chinensis
Sed0005595 Sechium edule
SEGI_00327 Sequoiadendron giganteum
SEGI_06522 Sequoiadendron giganteum
SEGI_36037 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43518 Striga asiatica
SGA_v2.0_scaffold2G00943 Striga asiatica
SHI03978 Sapria himalayana
SMO144G0043 Selaginella moellendorffii
SMO229G0006 Selaginella moellendorffii
Solyc03g097460.3 Solanum lycopersicum
Solyc05g150129.1 Solanum lycopersicum
Sopen03g028230 Solanum pennellii
Sp3g06440 Schrenkiella parvula
TAR633G1807 Trochodendron aralioides
THA.LOC104826716 Tarenaya hassleriana
Thecc.10G170400 Theobroma cacao
Thhalv10020176m.g Eutrema salsugineum
TPR.G9868 Trifolium pratense
TWI15G0624 Tripterygium wilfordii
unitig_32.g11142 Utricularia gibba
vmacro13739 Vaccinium macrocarpon
VMungo0251G1905 Vigna mungo
Zm00001eb143980 Zea mays

User provided reference genes

Program Settings