Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p38960 Brassica napus
Aa31LG3G2660 Aethionema arabicum
Aa31LG4G12340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1600 Anthoceros agrestis
Actinidia31271 Actinidia chinensis
Ah.08g210560 Amaranthus hybridus
Ah.08g210570 Amaranthus hybridus
AL3G21450 Arabidopsis lyrata
Aqoxy2G01179 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8A6FDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3GQ4Y Arachis hypogaea
AT3G10130 Arabidopsis thaliana
ATR0776G018 Amborella trichopoda
Atru.chr12.1331 Acer truncatum
Atru.chr8.1529 Acer truncatum
Atru.chr8.1531 Acer truncatum
AUR62006185 Chenopodium quinoa
AUR62028519 Chenopodium quinoa
BcaNung05910 Brassica carinata
BcaNung06241 Brassica carinata
BolC5t34455H Brassica oleracea
BraA05t22687Z Brassica rapa
C05p57990 Brassica napus
CAN.G1069.17 Capsicum annuum
CANSAT64G1380 Cannabis sativa
CARHR084610 Cardamine hirsuta
Carub.0008s0494 Capsella rubella
Ca_09008_v3 Cicer arietinum L.
CBR_g26276 Chara braunii
Cc06_g05810 Coffea canephora
CDE07G1033 Ceratophyllum demersum
Cfa016612 Carpinus fangiana
Ciclev10012335m.g Citrus clementina
CiPaw.09G014600 Carya illinoinensis
ClCG10G018950 Citrullus lanatus
COL.COLO4_29728 Corchorus olitorius
Cpa.g.sc5.16 Carica papaya
CsaV3_3G037300 Cucumis sativus L.
CSS0014047 Camellia sinensis var. sinensis
DCAR_013388 Daucus carota
Dinv21203 Davidia involucrata
ECA236G1922 Erigeron canadensis
EL10Ac7g16914 Beta vulgaris
Eucgr.A02662 Eucalyptus grandis
FAN02G1927 Fragaria x ananassa
FAN05G0931 Fragaria x ananassa
FAN05G5318 Fragaria x ananassa
FAN05G5513 Fragaria x ananassa
FAN14G2743 Fragaria x ananassa
FvH4_6g18800 Fragaria vesca
Glyma.03G196100 Glycine max
Glyma.19G194936 Glycine max
Gohir.A04G062500 Gossypium hirsutum
Gohir.D04G099500 Gossypium hirsutum
Gorai.009G402400 Gossypium raimondii
GSVIVG01033848001 Vitis vinifera
HanXRQChr05g0133131 Helianthus annuus
Haze_19616 Corylus avellana
Hma1.2p1_0232F.1_g097960 Hydrangea macrophylla
Hma1.2p1_0232F.1_g097970 Hydrangea macrophylla
HPP92_006351 Vanilla planifolia
Hund19930 Selenicereus undatus
Lalb_Chr01g0018141 Lupinus albus
Lj1g0017162 Lotus japonicus
Lj3A997G43 Lonicera japonica
Lsat_1_v5_gn_8_77160 Lactuca sativa
Lsat_1_v5_gn_9_103860 Lactuca sativa
Manes.08G025600 Manihot esculenta
Mapoly0131s0003 Marchantia polymorpha
MBI17_g08341_MAGBIO Magnolia biondii
MD12G1036600 Malus domestica
Medtr7g104650 Medicago truncatula
MELO3C009475.2 Cucumis melo
Migut.L01780 Erythranthe guttata
MSTRG.10367 Avicennia marina
Nitab4.5_0009023g0010 Nicotiana tabacum
Nitab4.5_0013616g0010 Nicotiana tabacum
Nn2g14162 Nelumbo nucifera
Os02g0533200 Oryza sativa ssp. japonica
Peaxi162Scf00096g00313 Petunia axillaris
PGR004G2635 Punica granatum
PGSC0003DMG400028255 Solanum tuberosum
Phvul.001G190400 Phaseolus vulgaris
Potri.016G098500 Populus trichocarpa
Pp3c23_15420 Physcomitrium patens
Prupe.7G109600 Prunus persica
PSO339G0456 Papaver somniferum
PSO384G2101 Papaver somniferum
QL07p038710 Quercus lobata
QL07p038960 Quercus lobata
RcHm_v2.0_Chr2g0159491 Rosa chinensis
RcHm_v2.0_Chr3g0473811 Rosa chinensis
Rhsim04G0131900 Rhododendron simsii
Sabra16G0099500 Salix brachista
SalBow5G0069 Salvia bowleyana
Sc20g0006300 Simmondsia chinensis
Sed0026247 Sechium edule
SEGI_00359 Sequoiadendron giganteum
SEGI_29247 Sequoiadendron giganteum
SEGI_38541 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14069 Striga asiatica
Solyc01g056880.3 Solanum lycopersicum
Solyc05g047480.2 Solanum lycopersicum
Solyc10g083350.2 Solanum lycopersicum
Sopen10g032850 Solanum pennellii
Sp3g08410 Schrenkiella parvula
TAR636G1909 Trochodendron aralioides
THA.LOC104816396 Tarenaya hassleriana
Thecc.05G089700 Theobroma cacao
Thhalv10021175m.g Eutrema salsugineum
TPR.G19533 Trifolium pratense
TWI74G1282 Tripterygium wilfordii
TWI77G0457 Tripterygium wilfordii
TWI77G0984 Tripterygium wilfordii
unitig_8.g4964 Utricularia gibba
vmacro08867 Vaccinium macrocarpon
VMungo1383G0588 Vigna mungo
Zm00001eb034360 Zea mays
Zm00001eb049670 Zea mays
Zm00001eb215690 Zea mays
Zm00001eb215700 Zea mays
Zm00001eb242810 Zea mays

User provided reference genes

Program Settings