Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05610 Brassica napus
A10p25410 Brassica napus
Aa31LG3G14820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis
Actinidia06932 Actinidia chinensis
Actinidia16353 Actinidia chinensis
Ah.06g193800 Amaranthus hybridus
AL6G23210 Arabidopsis lyrata
Aqoxy1G00310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea
AT5G12410 Arabidopsis thaliana
ATR0721G160 Amborella trichopoda
Atru.chr3.2633 Acer truncatum
AUR62000165 Chenopodium quinoa
AUR62039846 Chenopodium quinoa
BcaB01g05403 Brassica carinata
BcaB08g37001 Brassica carinata
BolC3t13156H Brassica oleracea
BolC3t13160H Brassica oleracea
BolC9t59282H Brassica oleracea
BraA03t09898Z Brassica rapa
BraA10t44605Z Brassica rapa
C03p06560 Brassica napus
C09p64480 Brassica napus
CAN.G633.4 Capsicum annuum
CANSAT54G0570 Cannabis sativa
CARHR200690 Cardamine hirsuta
Carub.0006s1091 Capsella rubella
CBR_g300 Chara braunii
Cc01_g06100 Coffea canephora
Cc01_g06170 Coffea canephora
CDE08G0181 Ceratophyllum demersum
Ciclev10015584m.g Citrus clementina
CiPaw.13G153800 Carya illinoinensis
ClCG03G013060 Citrullus lanatus
COL.COLO4_36476 Corchorus olitorius
Cpa.g.c41750 Carica papaya
Cpa.g.sc84.3 Carica papaya
Cre14.g629550 Chlamydomonas reinhardtii
CsaV3_1G043000 Cucumis sativus L.
CSS0036252 Camellia sinensis var. sinensis
CSS0047891 Camellia sinensis var. sinensis
DCAR_000660 Daucus carota
Dinv22152 Davidia involucrata
Dinv36213 Davidia involucrata
Duzib168G0228 Durio zibethinus
Duzib170G0947 Durio zibethinus
ECA238G1745 Erigeron canadensis
EL10Ac4g10185 Beta vulgaris
Eucgr.B03712 Eucalyptus grandis
FAN11G3700 Fragaria x ananassa
FAN16G0297 Fragaria x ananassa
FAN21G3651 Fragaria x ananassa
FvH4_3g28330 Fragaria vesca
Glyma.01G226800 Glycine max
Glyma.11G015900 Glycine max
Gohir.A09G111700 Gossypium hirsutum
Gohir.D09G108300 Gossypium hirsutum
Gorai.006G126000 Gossypium raimondii
GSVIVG01031548001 Vitis vinifera
HanXRQChr14g0433001 Helianthus annuus
Haze_23190 Corylus avellana
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla
HPP92_011577 Vanilla planifolia
Hund07453 Selenicereus undatus
Lalb_Chr09g0320561 Lupinus albus
LjContig00222g0000121 Lotus japonicus
Lju41A40T23 Lonicera japonica
Lsat_1_v5_gn_2_29261 Lactuca sativa
Manes.14G005500 Manihot esculenta
Mapoly0091s0083 Marchantia polymorpha
MBI13_g04769_MAGBIO Magnolia biondii
MCO09G159 Micromonas commoda
MD03G1170300 Malus domestica
MD11G1187800 Malus domestica
Medtr5g009010 Medicago truncatula
MELO3C015170.2 Cucumis melo
MELO3C029487.2 Cucumis melo
Migut.N02355 Erythranthe guttata
MSTRG.17620 Avicennia marina
Nitab4.5_0002726g0080 Nicotiana tabacum
Nitab4.5_0006878g0020 Nicotiana tabacum
Nn7g36445 Nelumbo nucifera
Oeu025891.1 Olea europaea
Oeu061298.1 Olea europaea
Os11g0568600 Oryza sativa ssp. japonica
Peaxi162Scf00004g03918 Petunia axillaris
PGR102G0709 Punica granatum
PGSC0003DMG400031244 Solanum tuberosum
Phvul.002G033900 Phaseolus vulgaris
Potri.001G254600 Populus trichocarpa
Potri.009G049700 Populus trichocarpa
Pp3c3_2270 Physcomitrium patens
PRCOL_00001563 Prasinoderma coloniale
Prupe.4G256800 Prunus persica
PSO339G6663 Papaver somniferum
PSO384G3463 Papaver somniferum
QL01p018092 Quercus lobata
QL01p018141 Quercus lobata
RcHm_v2.0_Chr5g0051211 Rosa chinensis
Sabra09G0036200 Salix brachista
Sabra16G0155200 Salix brachista
Sc09g0000890 Simmondsia chinensis
Sed0027042 Sechium edule
SEGI_14205 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16082 Striga asiatica
SHI46597 Sapria himalayana
SMO013G0006 Selaginella moellendorffii
Solyc11g065180.2 Solanum lycopersicum
Sopen11g024900 Solanum pennellii
Sp6g31230 Schrenkiella parvula
TAR633G0410 Trochodendron aralioides
THA.LOC104811185 Tarenaya hassleriana
Thecc.09G240800 Theobroma cacao
Thhalv10013724m.g Eutrema salsugineum
TPR.G38023 Trifolium pratense
TWI39G1226 Tripterygium wilfordii
unitig_27.g25003 Utricularia gibba
vmacro04120 Vaccinium macrocarpon
VMungo1215G3210 Vigna mungo
Zm00001eb200070 Zea mays

User provided reference genes

Program Settings