Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34890 Brassica napus
A05p00570 Brassica napus
Aa31LG1G28590 Aethionema arabicum
Actinidia25863 Actinidia chinensis
AL302U10010 Arabidopsis lyrata
AL4G46840 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea
AT2G47270 Arabidopsis thaliana
ATR0693G012 Amborella trichopoda
Atru.chr5.966 Acer truncatum
BcaB01g03174 Brassica carinata
BcaB02g08786 Brassica carinata
BcaB06g29454 Brassica carinata
BcaC01g05038 Brassica carinata
BolC3t15440H Brassica oleracea
BolC4t21695H Brassica oleracea
BraA05t19055Z Brassica rapa
BraSC79t46680Z Brassica rapa
C03p30880 Brassica napus
C04p00620 Brassica napus
C04p72660 Brassica napus
CAN.G1280.37 Capsicum annuum
CAN.G293.16 Capsicum annuum
CANSAT25G1528 Cannabis sativa
CARHR142670 Cardamine hirsuta
Carub.0004s3001 Capsella rubella
Ca_10619_v3 Cicer arietinum L.
Cfa005764 Carpinus fangiana
Ciclev10006764m.g Citrus clementina
Ciclev10022819m.g Citrus clementina
CiPaw.07G119400 Carya illinoinensis
CiPaw.08G087700 Carya illinoinensis
ClCG10G011560 Citrullus lanatus
COL.COLO4_23526 Corchorus olitorius
Cpa.g.sc18.81 Carica papaya
CsaV3_3G026610 Cucumis sativus L.
CSS0011798 Camellia sinensis var. sinensis
DCAR_002885 Daucus carota
DCAR_005744 Daucus carota
DCAR_012331 Daucus carota
DCAR_018278 Daucus carota
Dinv10120 Davidia involucrata
Duzib248G0337 Durio zibethinus
Duzib251G0664 Durio zibethinus
Duzib268G0572 Durio zibethinus
ECA247G3592 Erigeron canadensis
EL10As5g23562 Beta vulgaris
FAN19G2346 Fragaria x ananassa
FAN23G3047 Fragaria x ananassa
FAN26G3307 Fragaria x ananassa
FAN28G2331 Fragaria x ananassa
FvH4_1g26990 Fragaria vesca
Glyma.10G217100 Glycine max
Glyma.20G175000 Glycine max
Gohir.A01G157750 Gossypium hirsutum
Gohir.A12G145800 Gossypium hirsutum
Gohir.D01G152800 Gossypium hirsutum
Gohir.D12G150400 Gossypium hirsutum
Gorai.002G189200 Gossypium raimondii
Gorai.008G161900 Gossypium raimondii
HanXRQChr10g0285031 Helianthus annuus
HanXRQChr15g0465071 Helianthus annuus
Haze_05072 Corylus avellana
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla
Lalb_Chr02g0141791 Lupinus albus
Lalb_Chr03g0036161 Lupinus albus
Lj5g0010023 Lotus japonicus
Lsat_1_v5_gn_9_4661 Lactuca sativa
Manes.01G229900 Manihot esculenta
Manes.05G013600 Manihot esculenta
MBI18_g22340_MAGBIO Magnolia biondii
MD09G1285300 Malus domestica
MD17G1278000 Malus domestica
Medtr1g096530 Medicago truncatula
MELO3C012934.2 Cucumis melo
Migut.D00065 Erythranthe guttata
MSTRG.21702 Avicennia marina
Nitab4.5_0000222g0070 Nicotiana tabacum
Nitab4.5_0000363g0200 Nicotiana tabacum
Nitab4.5_0007407g0060 Nicotiana tabacum
Nn3g21744 Nelumbo nucifera
Nn4g25552 Nelumbo nucifera
Oeu008480.1 Olea europaea
Oeu038038.1 Olea europaea
Oeu044737.1 Olea europaea
Peaxi162Scf00058g00236 Petunia axillaris
PGSC0003DMG400009058 Solanum tuberosum
PGSC0003DMG401007298 Solanum tuberosum
Phvul.007G089100 Phaseolus vulgaris
Potri.002G193300 Populus trichocarpa
Potri.014G118300 Populus trichocarpa
Prupe.3G008700 Prunus persica
PSO210G6541 Papaver somniferum
PSO761G0312 Papaver somniferum
QL12p019056 Quercus lobata
RcHm_v2.0_Chr3g0487231 Rosa chinensis
Rhsim13G0003400 Rhododendron simsii
Sabra02G0162800 Salix brachista
Sabra14G0087800 Salix brachista
SalBow3G4324 Salvia bowleyana
Sc05g0000320 Simmondsia chinensis
Sc17g0000340 Simmondsia chinensis
Sed0017392 Sechium edule
SGA_v2.0_scaffold334G49085 Striga asiatica
SGA_v2.0_scaffold376G50290 Striga asiatica
Solyc01g079270.1 Solanum lycopersicum
Solyc06g009510.1 Solanum lycopersicum
Sopen01g031050 Solanum pennellii
Sopen06g004170 Solanum pennellii
Sp4g29240 Schrenkiella parvula
TAR362G1145 Trochodendron aralioides
TAR365G0268 Trochodendron aralioides
TAR633G2779 Trochodendron aralioides
THA.LOC104817451 Tarenaya hassleriana
Thecc.02G266700 Theobroma cacao
Thhalv10001736m.g Eutrema salsugineum
TPR.G8830 Trifolium pratense
TWI18G0834 Tripterygium wilfordii
TWI36G0249 Tripterygium wilfordii
vmacro02389 Vaccinium macrocarpon
VMungo0720G0102 Vigna mungo

User provided reference genes

Program Settings