Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p28390 Brassica napus
Aa31LG4G6800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis
Actinidia17779 Actinidia chinensis
Ah.00g001170 Amaranthus hybridus
Ah.04g160680 Amaranthus hybridus
Ah.14g079490 Amaranthus hybridus
Ah.14g079510 Amaranthus hybridus
AL2G36880 Arabidopsis lyrata
Aqoxy6G00397 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea
AT1G76730 Arabidopsis thaliana
ATR0584G152 Amborella trichopoda
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum
AUR62026675 Chenopodium quinoa
AUR62040584 Chenopodium quinoa
BcaB02g07073 Brassica carinata
BcaC08g45513 Brassica carinata
BolC6t38311H Brassica oleracea
BraA07t30475Z Brassica rapa
C06p31830 Brassica napus
CAN.G264.10 Capsicum annuum
CANSAT25G3312 Cannabis sativa
CARHR070270 Cardamine hirsuta
Carub.0002s2364 Capsella rubella
Ca_03250_v3 Cicer arietinum L.
CBR_g53679 Chara braunii
Cc10_g15070 Coffea canephora
CDE08G0315 Ceratophyllum demersum
Cfa018304 Carpinus fangiana
Ciclev10001828m.g Citrus clementina
CiPaw.16G009700 Carya illinoinensis
ClCG08G007080 Citrullus lanatus
COL.COLO4_03565 Corchorus olitorius
Cpa.g.sc49.98 Carica papaya
Cre13.g587450 Chlamydomonas reinhardtii
CsaV3_6G005110 Cucumis sativus L.
CsaV3_6G005120 Cucumis sativus L.
CSS0026250 Camellia sinensis var. sinensis
Dinv41054 Davidia involucrata
Duzib093G0633 Durio zibethinus
ECA247G1092 Erigeron canadensis
ECA247G1774 Erigeron canadensis
EL10Ac1g01586 Beta vulgaris
Eucgr.F02694 Eucalyptus grandis
Eucgr.K02158 Eucalyptus grandis
FAN15G0764 Fragaria x ananassa
FAN20G1322 Fragaria x ananassa
FAN24G0701 Fragaria x ananassa
FAN24G3498 Fragaria x ananassa
FAN27G2273 Fragaria x ananassa
FvH4_2g13270 Fragaria vesca
Glyma.02G080402 Glycine max
Glyma.16G164900 Glycine max
Gohir.A01G197500 Gossypium hirsutum
Gohir.D01G187700 Gossypium hirsutum
Gorai.002G231100 Gossypium raimondii
GSVIVG01034559001 Vitis vinifera
HanXRQChr04g0115661 Helianthus annuus
Haze_17787 Corylus avellana
HPP92_004409 Vanilla planifolia
Hund17460 Selenicereus undatus
Lj2g0010381 Lotus japonicus
Lj4A701T20 Lonicera japonica
Lsat_1_v5_gn_1_5280 Lactuca sativa
Manes.18G093500 Manihot esculenta
Mapoly0007s0250 Marchantia polymorpha
MBI19_g24720_MAGBIO Magnolia biondii
MCO02G484 Micromonas commoda
MCO03G555 Micromonas commoda
MD05G1030000 Malus domestica
Medtr6g037530 Medicago truncatula
Medtr6g037560 Medicago truncatula
MELO3C008332.2 Cucumis melo
Migut.C00976 Erythranthe guttata
MSTRG.1097 Avicennia marina
Nitab4.5_0001649g0020 Nicotiana tabacum
Nitab4.5_0006961g0030 Nicotiana tabacum
Nn5g28792 Nelumbo nucifera
Oeu002061.1 Olea europaea
Os12g0168000 Oryza sativa ssp. japonica
Peaxi162Scf00079g02332 Petunia axillaris
PGR042G3407 Punica granatum
PGSC0003DMG400006373 Solanum tuberosum
Phvul.004G092300 Phaseolus vulgaris
Potri.005G194800 Populus trichocarpa
Pp3c18_17520 Physcomitrium patens
Prupe.8G036900 Prunus persica
Psat1g100360 Pisum sativum
PSO541G2164 Papaver somniferum
QL02p037672 Quercus lobata
QL02p038646 Quercus lobata
RcHm_v2.0_Chr6g0274681 Rosa chinensis
Rhsim11G0111500 Rhododendron simsii
Sabra05G0148300 Salix brachista
SalBow7G0432 Salvia bowleyana
Sc26g0002400 Simmondsia chinensis
Sed0023841 Sechium edule
SEGI_13550 Sequoiadendron giganteum
SGA_v2.0_scaffold195G40788 Striga asiatica
SMO063G0001 Selaginella moellendorffii
SMO137G0185 Selaginella moellendorffii
SMO182G0010 Selaginella moellendorffii
SMO340G0128 Selaginella moellendorffii
Solyc04g071700.3 Solanum lycopersicum
Sopen04g027680 Solanum pennellii
Sp5g31870 Schrenkiella parvula
TAR625G0865 Trochodendron aralioides
THA.LOC104803355 Tarenaya hassleriana
THA.LOC104810664 Tarenaya hassleriana
THA.LOC104820721 Tarenaya hassleriana
Thecc.08G155700 Theobroma cacao
Thhalv10018779m.g Eutrema salsugineum
TPR.G28004 Trifolium pratense
TPR.G39968 Trifolium pratense
TWI34G0343 Tripterygium wilfordii
unitig_747.g21515 Utricularia gibba
vmacro01645 Vaccinium macrocarpon
VMungo0464G1775 Vigna mungo
Zm00001eb407750 Zea mays

User provided reference genes

Program Settings