Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G21780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis
Actinidia28904 Actinidia chinensis
Ah.15g092510 Amaranthus hybridus
AL8G27480 Arabidopsis lyrata
Aqoxy2G01774 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea
AT5G52970 Arabidopsis thaliana
ATR1093G019 Amborella trichopoda
AUR62040358 Chenopodium quinoa
AUR62042496 Chenopodium quinoa
BcaB05g21832 Brassica carinata
BcaC03g13011 Brassica carinata
BolC2t06093H Brassica oleracea
BraA02t04758Z Brassica rapa
C02p01030 Brassica napus
CAN.G1169.17 Capsicum annuum
CANSAT80G1747 Cannabis sativa
CARHR265950 Cardamine hirsuta
Carub.0008s1316 Capsella rubella
Ca_11495_v3 Cicer arietinum L.
CBR_g11899 Chara braunii
CBR_g20266 Chara braunii
Cc06_g04210 Coffea canephora
CDE09G0170 Ceratophyllum demersum
Cfa017605 Carpinus fangiana
Ciclev10012670m.g Citrus clementina
CiPaw.09G172700 Carya illinoinensis
ClCG04G009280 Citrullus lanatus
COL.COLO4_26969 Corchorus olitorius
Cpa.g.sc4277.1 Carica papaya
Cpa.g.sc54.73 Carica papaya
Cpa.g.sc54.74 Carica papaya
Cpa.g.sc54.75 Carica papaya
Cre03.g154600 Chlamydomonas reinhardtii
Cre15.g636050 Chlamydomonas reinhardtii
CsaV3_6G039870 Cucumis sativus L.
CSS0000889 Camellia sinensis var. sinensis
DCAR_020819 Daucus carota
Dinv37314 Davidia involucrata
Duzib093G0756 Durio zibethinus
ECA233G4064 Erigeron canadensis
EL10Ac7g16625 Beta vulgaris
Eucgr.A01683 Eucalyptus grandis
FAN05G5519 Fragaria x ananassa
FAN09G3810 Fragaria x ananassa
FAN14G3080 Fragaria x ananassa
FvH4_6g16320 Fragaria vesca
Glyma.10G056700 Glycine max
Gohir.A09G147100 Gossypium hirsutum
Gohir.D09G142700 Gossypium hirsutum
Gorai.006G164200 Gossypium raimondii
GSVIVG01025731001 Vitis vinifera
HanXRQChr13g0401051 Helianthus annuus
Haze_20550 Corylus avellana
HPP92_009890 Vanilla planifolia
HPP92_009893 Vanilla planifolia
HPP92_009894 Vanilla planifolia
Hund20313 Selenicereus undatus
Lalb_Chr06g0171711 Lupinus albus
Lj2A122G33 Lonicera japonica
Lj5g0006333 Lotus japonicus
Lj5g0024591 Lotus japonicus
Lsat_1_v5_gn_6_25121 Lactuca sativa
Manes.09G066600 Manihot esculenta
Mapoly0064s0090 Marchantia polymorpha
MBI18_g04983_MAGBIO Magnolia biondii
MCO09G250 Micromonas commoda
MCO12G278 Micromonas commoda
MD04G1093800 Malus domestica
MD12G1113500 Malus domestica
Medtr1g063350 Medicago truncatula
Medtr5g037320 Medicago truncatula
MELO3C024463.2 Cucumis melo
Migut.L01701 Erythranthe guttata
MSTRG.10320 Avicennia marina
Nitab4.5_0000063g0030 Nicotiana tabacum
Nitab4.5_0010279g0020 Nicotiana tabacum
Nn2g11585 Nelumbo nucifera
Nn2g13777 Nelumbo nucifera
Oeu016983.1 Olea europaea
Os07g0534000 Oryza sativa ssp. japonica
Peaxi162Scf00311g00059 Petunia axillaris
PGR004G0128 Punica granatum
PGSC0003DMG400010472 Solanum tuberosum
Phvul.007G219800 Phaseolus vulgaris
Potri.016G092300 Populus trichocarpa
Pp3c13_11800 Physcomitrium patens
PRCOL_00002491 Prasinoderma coloniale
PRCOL_00006412 Prasinoderma coloniale
Prupe.6G232400 Prunus persica
Psat6g072960 Pisum sativum
PSO339G0933 Papaver somniferum
PSO801G0526 Papaver somniferum
QL07p043583 Quercus lobata
RcHm_v2.0_Chr3g0470171 Rosa chinensis
Rhsim03G0092100 Rhododendron simsii
Sabra16G0097900 Salix brachista
SalBow5G2848 Salvia bowleyana
Sc02g0001640 Simmondsia chinensis
Sed0018427 Sechium edule
SEGI_20985 Sequoiadendron giganteum
SEGI_36386 Sequoiadendron giganteum
SEGI_38453 Sequoiadendron giganteum
SGA_v2.0_scaffold224G42946 Striga asiatica
SMO118G0079 Selaginella moellendorffii
Solyc10g084040.2 Solanum lycopersicum
Sopen10g033470 Solanum pennellii
Sp6g39380 Schrenkiella parvula
TAR636G3123 Trochodendron aralioides
THA.LOC104816347 Tarenaya hassleriana
Thecc.05G065700 Theobroma cacao
Thhalv10014610m.g Eutrema salsugineum
TPR.G11258 Trifolium pratense
TWI74G1602 Tripterygium wilfordii
unitig_578.g16041 Utricularia gibba
vmacro07290 Vaccinium macrocarpon
VMungo0720G1694 Vigna mungo
Zm00001eb088350 Zea mays

User provided reference genes

Program Settings