Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20010 Brassica napus
Aa31LG4G16360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis
Actinidia04898 Actinidia chinensis
Actinidia04899 Actinidia chinensis
Actinidia37633 Actinidia chinensis
Ah.11g048540 Amaranthus hybridus
AL5G26900 Arabidopsis lyrata
Aqoxy3G03367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea
AT3G47610 Arabidopsis thaliana
ATR0598G034 Amborella trichopoda
Atru.chr9.2260 Acer truncatum
AUR62008395 Chenopodium quinoa
AUR62021701 Chenopodium quinoa
BcaB01g00902 Brassica carinata
BcaB05g23063 Brassica carinata
BcaC01g01798 Brassica carinata
BolC3t19470H Brassica oleracea
BraA06t25087Z Brassica rapa
C03p71820 Brassica napus
CAN.G837.10 Capsicum annuum
CANSAT25G3319 Cannabis sativa
CARHR156290 Cardamine hirsuta
Carub.0005s1374 Capsella rubella
Ca_21826_v3 Cicer arietinum L.
Cc04_g16740 Coffea canephora
CDE06G2127 Ceratophyllum demersum
Cfa018953 Carpinus fangiana
Cfa027053 Carpinus fangiana
Ciclev10020397m.g Citrus clementina
CiPaw.11G043400 Carya illinoinensis
ClCG04G012330 Citrullus lanatus
Cpa.g.c35819 Carica papaya
Cpa.g.sc111.3 Carica papaya
CsaV3_1G005390 Cucumis sativus L.
CsaV3_1G005410 Cucumis sativus L.
CSS0004518 Camellia sinensis var. sinensis
CSS0042048 Camellia sinensis var. sinensis
DCAR_016545 Daucus carota
Dinv38701 Davidia involucrata
Duzib205G0457 Durio zibethinus
ECA247G0129 Erigeron canadensis
EL10Ac5g10987 Beta vulgaris
Eucgr.B00491 Eucalyptus grandis
FAN04G2599 Fragaria x ananassa
FAN08G2919 Fragaria x ananassa
FAN14G0637 Fragaria x ananassa
FAN18G0374 Fragaria x ananassa
FvH4_5g15050 Fragaria vesca
Glyma.17G099300 Glycine max
Gohir.A03G066400 Gossypium hirsutum
Gohir.D03G093000 Gossypium hirsutum
Gorai.003G096900 Gossypium raimondii
GSVIVG01008019001 Vitis vinifera
HanXRQChr02g0041061 Helianthus annuus
Haze_07334 Corylus avellana
Haze_07335 Corylus avellana
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla
HPP92_016797 Vanilla planifolia
HPP92_016827 Vanilla planifolia
Hund02657 Selenicereus undatus
Lalb_Chr07g0178001 Lupinus albus
Lj4g0004556 Lotus japonicus
Lj5A111T86 Lonicera japonica
Lsat_1_v5_gn_1_13281 Lactuca sativa
Manes.06G093400 Manihot esculenta
Mapoly0060s0059 Marchantia polymorpha
MBI05_g08284_MAGBIO Magnolia biondii
MBI05_g08285_MAGBIO Magnolia biondii
MD06G1192400 Malus domestica
MD14G1199100 Malus domestica
Medtr4g108590 Medicago truncatula
MELO3C001974.2 Cucumis melo
MELO3C035773.2 Cucumis melo
Migut.I00173 Erythranthe guttata
MSTRG.11386 Avicennia marina
Nitab4.5_0000842g0050 Nicotiana tabacum
Nitab4.5_0012137g0020 Nicotiana tabacum
Nn4g23149 Nelumbo nucifera
Oeu006508.1 Olea europaea
Os09g0413100 Oryza sativa ssp. japonica
Peaxi162Scf00274g00732 Petunia axillaris
PGR083G1696 Punica granatum
PGSC0003DMG400019513 Solanum tuberosum
Phvul.003G190700 Phaseolus vulgaris
Potri.003G168100 Populus trichocarpa
Potri.012G068900 Populus trichocarpa
Pp3c16_180 Physcomitrium patens
Pp3c16_188 Physcomitrium patens
PRCOL_00002459 Prasinoderma coloniale
Prupe.5G192200 Prunus persica
Psat4g051480 Pisum sativum
PSO063G0566 Papaver somniferum
QL10p016702 Quercus lobata
RcHm_v2.0_Chr7g0181151 Rosa chinensis
Rhsim08G0155500 Rhododendron simsii
Sabra12G0049100 Salix brachista
Sc12g0006320 Simmondsia chinensis
Sed0004898 Sechium edule
Sed0007979 Sechium edule
SEGI_20393 Sequoiadendron giganteum
SEGI_30902 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10913 Striga asiatica
Solyc03g116140.3 Solanum lycopersicum
Sopen03g035110 Solanum pennellii
Sp5g14300 Schrenkiella parvula
TAR371G1054 Trochodendron aralioides
TAR622G0117 Trochodendron aralioides
TAR629G1448 Trochodendron aralioides
THA.LOC104821445 Tarenaya hassleriana
Thecc.03G085100 Theobroma cacao
Thhalv10010423m.g Eutrema salsugineum
TPR.G34732 Trifolium pratense
TWI60G0844 Tripterygium wilfordii
unitig_0.g2528 Utricularia gibba
vmacro17549 Vaccinium macrocarpon
vmacro17551 Vaccinium macrocarpon
VMungo1215G1397 Vigna mungo
Zm00001eb312480 Zea mays

User provided reference genes

Program Settings