Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p41910 Brassica napus
Aa31LG2G5960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis
Actinidia15092 Actinidia chinensis
Actinidia37429 Actinidia chinensis
Ah.03g133040 Amaranthus hybridus
AL5G15370 Arabidopsis lyrata
Aqoxy3G01202 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea
AT3G26580 Arabidopsis thaliana
ATR0686G190 Amborella trichopoda
Atru.chr11.2104 Acer truncatum
AUR62005459 Chenopodium quinoa
AUR62024282 Chenopodium quinoa
BcaB01g00564 Brassica carinata
BcaC06g31063 Brassica carinata
BcaC06g33898 Brassica carinata
BcaC06g33900 Brassica carinata
BolC7t44080H Brassica oleracea
BraA06t27110Z Brassica rapa
C07p35560 Brassica napus
CAN.G832.5 Capsicum annuum
CANSAT35G0572 Cannabis sativa
CARHR147570 Cardamine hirsuta
Carub.0005s0457 Capsella rubella
Ca_22583_v3 Cicer arietinum L.
CBR_g8379 Chara braunii
Cc11_g15700 Coffea canephora
CDE02G2769 Ceratophyllum demersum
CDE09G1037 Ceratophyllum demersum
Cfa009208 Carpinus fangiana
Ciclev10032003m.g Citrus clementina
CiPaw.05G182700 Carya illinoinensis
ClCG05G025710 Citrullus lanatus
COL.COLO4_24263 Corchorus olitorius
Cpa.g.sc33.16 Carica papaya
Cre12.g528050 Chlamydomonas reinhardtii
CsaV3_5G031170 Cucumis sativus L.
CSS0000303 Camellia sinensis var. sinensis
DCAR_024432 Daucus carota
Dinv24788 Davidia involucrata
Duzib248G0112 Durio zibethinus
Duzib268G1404 Durio zibethinus
ECA233G5619 Erigeron canadensis
EL10Ac6g13801 Beta vulgaris
Eucgr.B03288 Eucalyptus grandis
FAN07G1259 Fragaria x ananassa
FAN12G0822 Fragaria x ananassa
FAN17G1845 Fragaria x ananassa
FAN22G2305 Fragaria x ananassa
FvH4_4g25530 Fragaria vesca
Glyma.17G134500 Glycine max
Gohir.A01G159600 Gossypium hirsutum
Gohir.D01G150500 Gossypium hirsutum
Gorai.002G186600 Gossypium raimondii
GSVIVG01004073001 Vitis vinifera
HanXRQChr08g0208131 Helianthus annuus
Haze_12245 Corylus avellana
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla
HPP92_002022 Vanilla planifolia
Lalb_Chr05g0228421 Lupinus albus
Lj4g0023216 Lotus japonicus
Lj6A811T79 Lonicera japonica
Lsat_1_v5_gn_8_152220 Lactuca sativa
Manes.13G024900 Manihot esculenta
Mapoly0037s0067 Marchantia polymorpha
MBI10_g13027_MAGBIO Magnolia biondii
MCO07G599 Micromonas commoda
MD13G1101900 Malus domestica
MD16G1102400 Malus domestica
Medtr8g069450 Medicago truncatula
MELO3C011955.2 Cucumis melo
Migut.K00595 Erythranthe guttata
MSTRG.568 Avicennia marina
Nitab4.5_0000007g0060 Nicotiana tabacum
Nitab4.5_0003628g0010 Nicotiana tabacum
Nn4g22628 Nelumbo nucifera
Oeu029879.1 Olea europaea
Oeu059907.1 Olea europaea
Os03g0428800 Oryza sativa ssp. japonica
Peaxi162Scf00128g00138 Petunia axillaris
PGR102G2745 Punica granatum
PGSC0003DMG400018605 Solanum tuberosum
Phvul.003G064400 Phaseolus vulgaris
Potri.013G090000 Populus trichocarpa
Pp3c27_6670 Physcomitrium patens
Pp3c6_29630 Physcomitrium patens
PRCOL_00004949 Prasinoderma coloniale
Prupe.1G243900 Prunus persica
Psat4g116680 Pisum sativum
PSO017G4849 Papaver somniferum
PSO478G4529 Papaver somniferum
QL03p058139 Quercus lobata
QL04p066147 Quercus lobata
RcHm_v2.0_Chr4g0432921 Rosa chinensis
RcHm_v2.0_Chr5g0067811 Rosa chinensis
Rhsim12G0041000 Rhododendron simsii
Rhsim12G0110600 Rhododendron simsii
Sabra13G0070200 Salix brachista
SalBow2G2200 Salvia bowleyana
Sc04g0009450 Simmondsia chinensis
Sed0005489 Sechium edule
SEGI_37038 Sequoiadendron giganteum
SMO347G0417 Selaginella moellendorffii
Solyc05g013480.4 Solanum lycopersicum
Sopen05g008320 Solanum pennellii
Sp2g15690 Schrenkiella parvula
TAR374G0845 Trochodendron aralioides
TAR622G1382 Trochodendron aralioides
TAR625G0150 Trochodendron aralioides
THA.LOC104825662 Tarenaya hassleriana
Thecc.02G259400 Theobroma cacao
Thhalv10004491m.g Eutrema salsugineum
TPR.G17765 Trifolium pratense
TWI18G0987 Tripterygium wilfordii
unitig_21.g20872 Utricularia gibba
unitig_744.g24293 Utricularia gibba
vmacro01127 Vaccinium macrocarpon
vmacro16198 Vaccinium macrocarpon
VMungo0251G1250 Vigna mungo
Zm00001eb096140 Zea mays

User provided reference genes

Program Settings