Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00960 Brassica napus
A10p32860 Brassica napus
Aa31LG9G15090 Aethionema arabicum
Actinidia10854 Actinidia chinensis
Ah.12g054100 Amaranthus hybridus
AL6G12170 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0CK7QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.35ICEA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9ERVU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEIN6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QHP4BN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2899S Arachis hypogaea
AT5G02890 Arabidopsis thaliana
ATR0681G238 Amborella trichopoda
Atru.chr9.1232 Acer truncatum
AUR62007149 Chenopodium quinoa
AUR62018862 Chenopodium quinoa
BcaB01g05868 Brassica carinata
BcaB05g21861 Brassica carinata
BcaB05g21862 Brassica carinata
BcaC03g13041 Brassica carinata
BcaC06g32017 Brassica carinata
BolC2t06069H Brassica oleracea
BolC3t12683H Brassica oleracea
BolC9t60112H Brassica oleracea
BraA02t04734Z Brassica rapa
BraA02t04736Z Brassica rapa
BraA03t09478Z Brassica rapa
BraA10t45323Z Brassica rapa
C02p00710 Brassica napus
C03p01240 Brassica napus
C09p73780 Brassica napus
CANSAT21G2335 Cannabis sativa
CARHR210430 Cardamine hirsuta
Carub.0006s0170 Capsella rubella
Cc08_g11520 Coffea canephora
CDE02G4102 Ceratophyllum demersum
CDE11G0993 Ceratophyllum demersum
Ciclev10020680m.g Citrus clementina
CiPaw.11G069200 Carya illinoinensis
COL.COLO4_21681 Corchorus olitorius
CSS0033598 Camellia sinensis var. sinensis
CSS0044996 Camellia sinensis var. sinensis
DCAR_004597 Daucus carota
DCAR_004598 Daucus carota
DCAR_031222 Daucus carota
Dinv28856 Davidia involucrata
EL10Ac5g12292 Beta vulgaris
EL10Ac5g12293 Beta vulgaris
EL10Ac5g12294 Beta vulgaris
Eucgr.D02122 Eucalyptus grandis
FAN08G0892 Fragaria x ananassa
FAN13G3305 Fragaria x ananassa
FAN18G4265 Fragaria x ananassa
FvH4_5g20090 Fragaria vesca
Glyma.11G037200 Glycine max
Gohir.A08G165850 Gossypium hirsutum
Gohir.A11G028750 Gossypium hirsutum
Gohir.D08G184700 Gossypium hirsutum
Gohir.D11G027200 Gossypium hirsutum
Gorai.004G194000 Gossypium raimondii
Gorai.007G029700 Gossypium raimondii
GSVIVG01007346001 Vitis vinifera
Haze_22481 Corylus avellana
Hund11328 Selenicereus undatus
Hund14499 Selenicereus undatus
Lalb_Chr16g0379401 Lupinus albus
Lalb_Chr16g0386471 Lupinus albus
Manes.02G043800 Manihot esculenta
MD04G1050800 Malus domestica
Medtr5g013270 Medicago truncatula
Migut.D01281 Erythranthe guttata
Migut.D01605 Erythranthe guttata
MSTRG.4612 Avicennia marina
MSTRG.9337 Avicennia marina
Nitab4.5_0000185g0210 Nicotiana tabacum
Nitab4.5_0000500g0020 Nicotiana tabacum
Nitab4.5_0006328g0020 Nicotiana tabacum
Nitab4.5_0006594g0020 Nicotiana tabacum
Oeu040678.1 Olea europaea
Oeu062962.1 Olea europaea
Os02g0653400 Oryza sativa ssp. japonica
Os04g0545700 Oryza sativa ssp. japonica
Os08g0352250 Oryza sativa ssp. japonica
Peaxi162Scf00102g00825 Petunia axillaris
Peaxi162Scf00446g00414 Petunia axillaris
PGR031G3435 Punica granatum
PGSC0003DMG400020489 Solanum tuberosum
PGSC0003DMG400026254 Solanum tuberosum
Phvul.002G000900 Phaseolus vulgaris
Potri.001G152500 Populus trichocarpa
Potri.003G082100 Populus trichocarpa
Prupe.5G059300 Prunus persica
Psat2g176320 Pisum sativum
QL12p009381 Quercus lobata
QL12p009385 Quercus lobata
QL12p009454 Quercus lobata
QL12p009487 Quercus lobata
RcHm_v2.0_Chr7g0204981 Rosa chinensis
Rhsim07G0118000 Rhododendron simsii
Sabra01G0122500 Salix brachista
Sabra03G0052900 Salix brachista
SalBow1G7537 Salvia bowleyana
Sc07g0009110 Simmondsia chinensis
Solyc08g007210.4 Solanum lycopersicum
Solyc08g078030.4 Solanum lycopersicum
Sopen08g003160 Solanum pennellii
Sopen08g026540 Solanum pennellii
Sp6g39700 Schrenkiella parvula
THA.LOC104807967 Tarenaya hassleriana
THA.LOC104812733 Tarenaya hassleriana
Thecc.03G243600 Theobroma cacao
Thhalv10013950m.g Eutrema salsugineum
TPR.G31420 Trifolium pratense
TWI60G0912 Tripterygium wilfordii
unitig_26.g9748 Utricularia gibba
unitig_61.g26373 Utricularia gibba
vmacro14132 Vaccinium macrocarpon
VMungo0251G0626 Vigna mungo
VMungo1215G1742 Vigna mungo
Zm00001eb179050 Zea mays
Zm00001eb186310 Zea mays

User provided reference genes

Program Settings