Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17600 Brassica napus
A10p04320 Brassica napus
A10p04420 Brassica napus
Aa31LG5G5440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis
Actinidia34608 Actinidia chinensis
Actinidia35970 Actinidia chinensis
AL4G26710 Arabidopsis lyrata
Aqoxy2G04100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea
AT2G31440 Arabidopsis thaliana
ATR0686G132 Amborella trichopoda
Atru.chr3.1537 Acer truncatum
AUR62002287 Chenopodium quinoa
AUR62015408 Chenopodium quinoa
BcaB01g04045 Brassica carinata
BcaC01g05952 Brassica carinata
BolC3t14452H Brassica oleracea
BraA03t11027Z Brassica rapa
BraA10t42699Z Brassica rapa
BraA10t42709Z Brassica rapa
C03p20710 Brassica napus
CAN.G65.183 Capsicum annuum
CANSAT78G1337 Cannabis sativa
CARHR125090 Cardamine hirsuta
Carub.0004s1277 Capsella rubella
Ca_20779_v3 Cicer arietinum L.
CBR_g29804 Chara braunii
Cc00_g09850 Coffea canephora
CDE04G1858 Ceratophyllum demersum
Ciclev10021930m.g Citrus clementina
CiPaw.01G101300 Carya illinoinensis
ClCG08G004470 Citrullus lanatus
COL.COLO4_24411 Corchorus olitorius
Cpa.g.c46401 Carica papaya
Cpa.g.sc409.1 Carica papaya
Cre13.g576300 Chlamydomonas reinhardtii
CsaV3_6G003840 Cucumis sativus L.
CSS0005792 Camellia sinensis var. sinensis
DCAR_022903 Daucus carota
Dinv22722 Davidia involucrata
Dinv44198 Davidia involucrata
Duzib212G0958 Durio zibethinus
Duzib268G1074 Durio zibethinus
EL10Ac3g05587 Beta vulgaris
Eucgr.A00074 Eucalyptus grandis
Eucgr.A00271 Eucalyptus grandis
FAN07G2858 Fragaria x ananassa
FvH4_4g11160 Fragaria vesca
Glyma.11G128700 Glycine max
Glyma.12G053200 Glycine max
Gohir.A02G015200 Gossypium hirsutum
Gohir.D02G016700 Gossypium hirsutum
Gorai.005G020200 Gossypium raimondii
GSVIVG01010746001 Vitis vinifera
HanXRQChr14g0433111 Helianthus annuus
Haze_01534 Corylus avellana
HPP92_005584 Vanilla planifolia
HPP92_005589 Vanilla planifolia
Hund03149 Selenicereus undatus
Lalb_Chr01g0003221 Lupinus albus
Lj3g0010197 Lotus japonicus
Lj6A56G22 Lonicera japonica
Lj6P622T45 Lonicera japonica
Lsat_1_v5_gn_2_34721 Lactuca sativa
Manes.04G042325 Manihot esculenta
Mapoly0042s0024 Marchantia polymorpha
MD04G1039500 Malus domestica
Medtr4g067050 Medicago truncatula
MELO3C011641.2 Cucumis melo
Migut.C00288 Erythranthe guttata
MSTRG.24999 Avicennia marina
Nitab4.5_0003132g0110 Nicotiana tabacum
Nitab4.5_0004579g0020 Nicotiana tabacum
Nn1g09574 Nelumbo nucifera
Oeu011639.1 Olea europaea
Os02g0272600 Oryza sativa ssp. japonica
Peaxi162Scf00375g00618 Petunia axillaris
PGR083G1737 Punica granatum
PGSC0003DMG400027008 Solanum tuberosum
Phvul.011G055200 Phaseolus vulgaris
Potri.007G127400 Populus trichocarpa
Pp3c10_5780 Physcomitrium patens
Pp3c14_4280 Physcomitrium patens
PRCOL_00006256 Prasinoderma coloniale
Prupe.1G190300 Prunus persica
Psat7g214000 Pisum sativum
PSO017G0422 Papaver somniferum
PSO229G0026 Papaver somniferum
PSO675G1145 Papaver somniferum
PSO675G6606 Papaver somniferum
PSO675G9308 Papaver somniferum
PSO732G0008 Papaver somniferum
PSO832G3398 Papaver somniferum
QL10p048350 Quercus lobata
RcHm_v2.0_Chr4g0407291 Rosa chinensis
Rhsim09G0028500 Rhododendron simsii
Sabra07G0103400 Salix brachista
SalBow7G4202 Salvia bowleyana
Sc25g0002980 Simmondsia chinensis
Sed0000584 Sechium edule
SEGI_14947 Sequoiadendron giganteum
SGA_v2.0_scaffold191G40507 Striga asiatica
SGA_v2.0_scaffold74G24571 Striga asiatica
SHI21233 Sapria himalayana
SMO174G0097 Selaginella moellendorffii
Solyc06g073410.3 Solanum lycopersicum
Sopen06g005930 Solanum pennellii
Sopen06g029790 Solanum pennellii
Sp4g13920 Schrenkiella parvula
TAR633G2589 Trochodendron aralioides
THA.LOC104826193 Tarenaya hassleriana
Thecc.04G185300 Theobroma cacao
Thhalv10017140m.g Eutrema salsugineum
TPR.G34202 Trifolium pratense
TWI63G0033 Tripterygium wilfordii
unitig_747.g21541 Utricularia gibba
vmacro00700 Vaccinium macrocarpon
vmacro22675 Vaccinium macrocarpon
VMungo1127G2200 Vigna mungo
Zm00001eb237480 Zea mays

User provided reference genes

Program Settings