Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29930 Brassica napus
A09p26400 Brassica napus
Aa31LG9G9880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis
Actinidia11871 Actinidia chinensis
Ah.09g234560 Amaranthus hybridus
AL6G47860 Arabidopsis lyrata
Aqoxy1G03005 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea
AT4G04320 Arabidopsis thaliana
ATR0686G032 Amborella trichopoda
Atru.chr10.2274 Acer truncatum
AUR62012752 Chenopodium quinoa
AUR62021906 Chenopodium quinoa
BcaB01g02601 Brassica carinata
BcaC01g04564 Brassica carinata
BcaC02g09432 Brassica carinata
BolC3t15931H Brassica oleracea
BolC3t18504H Brassica oleracea
BolC9t56193H Brassica oleracea
BraA03t12182Z Brassica rapa
BraA09t38214Z Brassica rapa
BraA09t38215Z Brassica rapa
C03p36220 Brassica napus
C03p62470 Brassica napus
C09p33590 Brassica napus
CAN.G23.21 Capsicum annuum
CANSAT56G3727 Cannabis sativa
CARHR253140 Cardamine hirsuta
Carub.0006s3215 Capsella rubella
Carub.0007s3335 Capsella rubella
Ca_00689_v3 Cicer arietinum L.
CBR_g2794 Chara braunii
CBR_g2795 Chara braunii
Cc09_g01280 Coffea canephora
CDE06G1909 Ceratophyllum demersum
Cfa000168 Carpinus fangiana
Ciclev10015047m.g Citrus clementina
CiPaw.09G097300 Carya illinoinensis
ClCG01G009650 Citrullus lanatus
COL.COLO4_37574 Corchorus olitorius
Cpa.g.c42047 Carica papaya
Cre02.g145200 Chlamydomonas reinhardtii
CsaV3_1G046130 Cucumis sativus L.
DCAR_024986 Daucus carota
Dinv13934 Davidia involucrata
Duzib235G1465 Durio zibethinus
ECA248G3623 Erigeron canadensis
EL10Ac8g20123 Beta vulgaris
Eucgr.E03992 Eucalyptus grandis
Eucgr.E03995 Eucalyptus grandis
FAN21G0938 Fragaria x ananassa
FAN25G2414 Fragaria x ananassa
FvH4_3g01470 Fragaria vesca
Glyma.09G007100 Glycine max
Glyma.15G111500 Glycine max
Gohir.A10G011200 Gossypium hirsutum
Gohir.D10G010800 Gossypium hirsutum
Gorai.011G011900 Gossypium raimondii
GSVIVG01012659001 Vitis vinifera
HanXRQChr01g0006511 Helianthus annuus
Haze_06851 Corylus avellana
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla
HPP92_010356 Vanilla planifolia
Hund23439 Selenicereus undatus
Lalb_Chr18g0056581 Lupinus albus
Lj1C1235T17 Lonicera japonica
Lj6g0003188 Lotus japonicus
Lsat_1_v5_gn_1_129581 Lactuca sativa
Manes.17G027900 Manihot esculenta
Mapoly0112s0027 Marchantia polymorpha
MD05G1351700 Malus domestica
Medtr2g024310 Medicago truncatula
MELO3C021729.2 Cucumis melo
Migut.H01587 Erythranthe guttata
MSTRG.14630 Avicennia marina
Nitab4.5_0000005g0020 Nicotiana tabacum
Nitab4.5_0002668g0020 Nicotiana tabacum
Nitab4.5_0017473g0010 Nicotiana tabacum
Nn1g07251 Nelumbo nucifera
Oeu049693.4 Olea europaea
Os09g0394100 Oryza sativa ssp. japonica
Peaxi162Scf00294g01013 Petunia axillaris
PGR042G2820 Punica granatum
PGSC0003DMG401021462 Solanum tuberosum
PGSC0003DMG402021462 Solanum tuberosum
Phvul.006G146200 Phaseolus vulgaris
Potri.004G005500 Populus trichocarpa
Potri.011G010400 Populus trichocarpa
Pp3c1_9420 Physcomitrium patens
Prupe.4G015900 Prunus persica
Prupe.I000100 Prunus persica
Psat1g177760 Pisum sativum
PSO541G2423 Papaver somniferum
QL05p072061 Quercus lobata
RcHm_v2.0_Chr3g0487171 Rosa chinensis
RcHm_v2.0_Chr5g0002321 Rosa chinensis
RcHm_v2.0_Chr5g0002771 Rosa chinensis
Rhsim02G0105100 Rhododendron simsii
Sabra04G0002800 Salix brachista
Sc05g0009420 Simmondsia chinensis
Sed0002831 Sechium edule
SEGI_21824 Sequoiadendron giganteum
SGA_v2.0_scaffold89G27482 Striga asiatica
Solyc02g036290.4 Solanum lycopersicum
Solyc02g036300.3 Solanum lycopersicum
Solyc02g036310.4 Solanum lycopersicum
Sopen02g011690 Solanum pennellii
Sp6g04530 Schrenkiella parvula
TAR626G0131 Trochodendron aralioides
THA.LOC104812977 Tarenaya hassleriana
Thecc.06G227200 Theobroma cacao
Thhalv10028619m.g Eutrema salsugineum
TPR.G13151 Trifolium pratense
TPR.G33068 Trifolium pratense
TWI38G0380 Tripterygium wilfordii
unitig_61.g26097 Utricularia gibba
vmacro15802 Vaccinium macrocarpon
VMungo0540G1326 Vigna mungo
Zm00001eb099100 Zea mays

User provided reference genes

Program Settings