Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p44130 Brassica napus
A05p02280 Brassica napus
Aa31LG1G16150 Aethionema arabicum
Aa31LG4G18290 Aethionema arabicum
Actinidia27993 Actinidia chinensis
Ah.01g007070 Amaranthus hybridus
AL8G43700 Arabidopsis lyrata
Aqoxy5G01709 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.648H43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HPS7HM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VT3BTZ Arachis hypogaea
AT5G67600 Arabidopsis thaliana
ATR0739G136 Amborella trichopoda
Atru.chr5.2330 Acer truncatum
AUR62030851 Chenopodium quinoa
BcaC03g18364 Brassica carinata
BcaNung05866 Brassica carinata
BcaNung05869 Brassica carinata
BolC2t12503H Brassica oleracea
BolC3t18227H Brassica oleracea
BolC4t21911H Brassica oleracea
BraA02t09336Z Brassica rapa
BraA05t19223Z Brassica rapa
BraA06t26214Z Brassica rapa
C02p64390 Brassica napus
C03p59650 Brassica napus
C04p02710 Brassica napus
CANSAT01G0131 Cannabis sativa
CANSAT25G2579 Cannabis sativa
CANSAT25G3637 Cannabis sativa
CARHR279990 Cardamine hirsuta
Carub.0008s2687 Capsella rubella
Ca_02937_v3 Cicer arietinum L.
Ca_22100_v3 Cicer arietinum L.
CDE04G3098 Ceratophyllum demersum
CDE06G1753 Ceratophyllum demersum
CDE07G0925 Ceratophyllum demersum
Cfa004139 Carpinus fangiana
Cfa004668 Carpinus fangiana
Ciclev10026875m.g Citrus clementina
Ciclev10029655m.g Citrus clementina
CiPaw.05G018800 Carya illinoinensis
CiPaw.06G165200 Carya illinoinensis
ClCG10G010140 Citrullus lanatus
CsaV3_4G000160 Cucumis sativus L.
CsaV3_7G007760 Cucumis sativus L.
CSS0021262 Camellia sinensis var. sinensis
CSS0022822 Camellia sinensis var. sinensis
Dinv04040 Davidia involucrata
Dinv26940 Davidia involucrata
Dinv42239 Davidia involucrata
Duzib052G0836 Durio zibethinus
Duzib132G0199 Durio zibethinus
Duzib248G1096 Durio zibethinus
ECA236G3390 Erigeron canadensis
ECA240G3635 Erigeron canadensis
EL10Ac9g22194 Beta vulgaris
Eucgr.I02594 Eucalyptus grandis
FAN26G0795 Fragaria x ananassa
Glyma.01G242200 Glycine max
Glyma.10G256400 Glycine max
Glyma.11G002000 Glycine max
Glyma.17G160200 Glycine max
Glyma.20G135200 Glycine max
Gohir.A03G181900 Gossypium hirsutum
Gohir.D02G203600 Gossypium hirsutum
Gohir.D04G159800 Gossypium hirsutum
Gohir.D12G019700 Gossypium hirsutum
Gohir.D13G019750 Gossypium hirsutum
Gorai.005G230700 Gossypium raimondii
Gorai.008G020000 Gossypium raimondii
GSVIVG01002630001 Vitis vinifera
GSVIVG01037814001 Vitis vinifera
HanXRQChr09g0250981 Helianthus annuus
HanXRQChr16g0509341 Helianthus annuus
Haze_10267 Corylus avellana
HPP92_006071 Vanilla planifolia
HPP92_006076 Vanilla planifolia
HPP92_007768 Vanilla planifolia
HPP92_007868 Vanilla planifolia
Lalb_Chr02g0144951 Lupinus albus
Lalb_Chr06g0165061 Lupinus albus
Lalb_Chr16g0389271 Lupinus albus
Lj5g0022695 Lotus japonicus
Manes.07G058300 Manihot esculenta
Manes.12G115500 Manihot esculenta
Manes.13G110700 Manihot esculenta
Mapoly0053s0033 Marchantia polymorpha
MD02G1187200 Malus domestica
Medtr5g005220 Medicago truncatula
Migut.B00452 Erythranthe guttata
Oeu013796.1 Olea europaea
Peaxi162Scf00152g00528 Petunia axillaris
PGR042G0423 Punica granatum
PGR042G3724 Punica granatum
PGSC0003DMG400021608 Solanum tuberosum
Phvul.003G234200 Phaseolus vulgaris
Phvul.003G234300 Phaseolus vulgaris
Phvul.007G046300 Phaseolus vulgaris
Potri.009G086900 Populus trichocarpa
Potri.014G005200 Populus trichocarpa
Prupe.6G219500 Prunus persica
Psat4g081440 Pisum sativum
Psat6g213720 Pisum sativum
PSO017G6129 Papaver somniferum
PSO170G0329 Papaver somniferum
RcHm_v2.0_Chr2g0108271 Rosa chinensis
Sabra09G0066500 Salix brachista
Sc08g0004430 Simmondsia chinensis
Sed0014956 Sechium edule
Sed0015576 Sechium edule
SMO163G0020 Selaginella moellendorffii
Solyc09g098300.3 Solanum lycopersicum
Sp2g29050 Schrenkiella parvula
Sp5g05410 Schrenkiella parvula
THA.LOC104819527 Tarenaya hassleriana
THA.LOC104821207 Tarenaya hassleriana
Thecc.02G118300 Theobroma cacao
TPR.G21131 Trifolium pratense
TPR.G24213 Trifolium pratense
TWI14G1419 Tripterygium wilfordii
TWI59G0168 Tripterygium wilfordii

User provided reference genes

Program Settings