Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09880 Brassica napus
Aa31sc124G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis
Actinidia09758 Actinidia chinensis
AL7G44540 Arabidopsis lyrata
Aqoxy1G02869 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea
AT5G35690 Arabidopsis thaliana
ATR1001G009 Amborella trichopoda
ATR1128G020 Amborella trichopoda
Atru.chr6.3278 Acer truncatum
Atru.chr6.3294 Acer truncatum
AUR62015107 Chenopodium quinoa
AUR62017570 Chenopodium quinoa
BcaB04g17860 Brassica carinata
BcaB06g26964 Brassica carinata
BcaB06g26965 Brassica carinata
BcaB06g26968 Brassica carinata
BcaC02g09488 Brassica carinata
BolC4t25914H Brassica oleracea
BraA04t16650Z Brassica rapa
C04p43360 Brassica napus
CAN.G931.8 Capsicum annuum
CANSAT64G1714 Cannabis sativa
CARHR217000 Cardamine hirsuta
Carub.0007s3142 Capsella rubella
Ca_16350_v3 Cicer arietinum L.
Cc05_g02470 Coffea canephora
CDE10G0956 Ceratophyllum demersum
CDE10G0969 Ceratophyllum demersum
Cfa014298 Carpinus fangiana
Cfa025683 Carpinus fangiana
Ciclev10014523m.g Citrus clementina
CiPaw.03G274100 Carya illinoinensis
ClCG02G018190 Citrullus lanatus
COL.COLO4_32787 Corchorus olitorius
Cpa.g.sc132.47 Carica papaya
Cre16.g684000 Chlamydomonas reinhardtii
CsaV3_6G015570 Cucumis sativus L.
CSS0002282 Camellia sinensis var. sinensis
CSS0049970 Camellia sinensis var. sinensis
DCAR_019250 Daucus carota
Dinv08706 Davidia involucrata
Duzib133G1057 Durio zibethinus
ECA236G0541 Erigeron canadensis
EL10Ac9g22807 Beta vulgaris
Eucgr.K00730 Eucalyptus grandis
FAN02G4367 Fragaria x ananassa
FAN03G2558 Fragaria x ananassa
FAN09G3579 Fragaria x ananassa
FAN14G2540 Fragaria x ananassa
FAN15G1469 Fragaria x ananassa
FAN27G2805 Fragaria x ananassa
FvH4_6g41820 Fragaria vesca
Glyma.20G058500 Glycine max
Gohir.A07G188400 Gossypium hirsutum
Gohir.D07G195000 Gossypium hirsutum
Gorai.001G218200 Gossypium raimondii
GSVIVG01030533001 Vitis vinifera
HanXRQChr16g0508331 Helianthus annuus
Haze_12746 Corylus avellana
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla
HPP92_018405 Vanilla planifolia
Hund24188 Selenicereus undatus
Lalb_Chr08g0236491 Lupinus albus
Lj1A785T50 Lonicera japonica
Lj6g0023666 Lotus japonicus
Lsat_1_v5_gn_7_94721 Lactuca sativa
Manes.12G056700 Manihot esculenta
Mapoly0071s0087 Marchantia polymorpha
MBI19_g29441_MAGBIO Magnolia biondii
MCO07G103 Micromonas commoda
MD09G1117000 Malus domestica
MD17G1108500 Malus domestica
Medtr3g082840 Medicago truncatula
MELO3C019717.2 Cucumis melo
Migut.H01255 Erythranthe guttata
MSTRG.14123 Avicennia marina
Nitab4.5_0000622g0140 Nicotiana tabacum
Nitab4.5_0005875g0040 Nicotiana tabacum
Nn1g03345 Nelumbo nucifera
Oeu061995.2 Olea europaea
Os08g0500800 Oryza sativa ssp. japonica
Peaxi162Scf00047g02037 Petunia axillaris
PGR142G2443 Punica granatum
PGSC0003DMG400013890 Solanum tuberosum
Phvul.006G013400 Phaseolus vulgaris
Potri.014G160400 Populus trichocarpa
Pp3c20_8530 Physcomitrium patens
Prupe.3G206900 Prunus persica
Psat5g104000 Pisum sativum
PSO541G4152 Papaver somniferum
QL08p029933 Quercus lobata
RcHm_v2.0_Chr2g0157621 Rosa chinensis
Rhsim06G0169800 Rhododendron simsii
Sabra14G0122100 Salix brachista
SalBow1G8616 Salvia bowleyana
SalBow3G0397 Salvia bowleyana
Sc20g0005070 Simmondsia chinensis
Sed0022132 Sechium edule
SEGI_11846 Sequoiadendron giganteum
SEGI_28144 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31585 Striga asiatica
SGA_v2.0_scaffold49G18363 Striga asiatica
SHI10236 Sapria himalayana
SHI10239 Sapria himalayana
Solyc12g005980.2 Solanum lycopersicum
Sopen12g001950 Solanum pennellii
Sp7g06570 Schrenkiella parvula
TAR624G0329 Trochodendron aralioides
THA.LOC104808864 Tarenaya hassleriana
Thecc.01G184900 Theobroma cacao
Thhalv10003827m.g Eutrema salsugineum
TPR.G22470 Trifolium pratense
TPR.G7490 Trifolium pratense
TWI18G1412 Tripterygium wilfordii
unitig_26.g9922 Utricularia gibba
vmacro12144 Vaccinium macrocarpon
VMungo0331G0347 Vigna mungo
VMungo0540G0580 Vigna mungo
Zm00001eb034180 Zea mays

User provided reference genes

Program Settings