Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04680 Brassica napus
Aa31sc21G60 Aethionema arabicum
Actinidia00310 Actinidia chinensis
Actinidia02398 Actinidia chinensis
Ah.01g007370 Amaranthus hybridus
Ah.01g023880 Amaranthus hybridus
AL7G17860 Arabidopsis lyrata
Aqoxy6G00830 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea
AT4G33640 Arabidopsis thaliana
ATR0767G170 Amborella trichopoda
Atru.chr6.1284 Acer truncatum
AUR62027098 Chenopodium quinoa
AUR62030940 Chenopodium quinoa
BcaC09g52175 Brassica carinata
BolC1t00489H Brassica oleracea
BraA01t00451Z Brassica rapa
C01p05070 Brassica napus
CAN.G31.4 Capsicum annuum
CANSAT21G1972 Cannabis sativa
CARHR241740 Cardamine hirsuta
Carub.0007s0679 Capsella rubella
Ca_00167_v3 Cicer arietinum L.
Ca_18387_v3 Cicer arietinum L.
Cc02_g20840 Coffea canephora
CDE07G0501 Ceratophyllum demersum
Cfa004847 Carpinus fangiana
Ciclev10029672m.g Citrus clementina
CiPaw.05G028900 Carya illinoinensis
ClCG10G009640 Citrullus lanatus
COL.COLO4_32404 Corchorus olitorius
CsaV3_4G014760 Cucumis sativus L.
CSS0011274 Camellia sinensis var. sinensis
DCAR_003600 Daucus carota
Dinv16007 Davidia involucrata
Dinv24144 Davidia involucrata
Duzib248G1107 Durio zibethinus
ECA234G2655 Erigeron canadensis
ECA236G0856 Erigeron canadensis
EL10Ac9g22060 Beta vulgaris
Eucgr.I02615 Eucalyptus grandis
FAN15G1663 Fragaria x ananassa
FAN20G2769 Fragaria x ananassa
FAN24G2600 Fragaria x ananassa
FAN27G2089 Fragaria x ananassa
FvH4_2g11550 Fragaria vesca
Glyma.07G182600 Glycine max
Glyma.08G067300 Glycine max
Gohir.A13G050500 Gossypium hirsutum
Gohir.D13G049300 Gossypium hirsutum
Gorai.013G055100 Gossypium raimondii
GSVIVG01012516001 Vitis vinifera
HanXRQChr08g0227171 Helianthus annuus
HanXRQChr10g0297761 Helianthus annuus
Haze_10502 Corylus avellana
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla
HPP92_001604 Vanilla planifolia
Hund06469 Selenicereus undatus
Lalb_Chr09g0326921 Lupinus albus
Lalb_Chr16g0382981 Lupinus albus
Lj4g0001130 Lotus japonicus
Lj9A347T51 Lonicera japonica
Lsat_1_v5_gn_5_110181 Lactuca sativa
Lsat_1_v5_gn_7_82720 Lactuca sativa
Manes.07G041500 Manihot esculenta
Mapoly0189s0006 Marchantia polymorpha
MBI16_g06019_MAGBIO Magnolia biondii
MCO12G136 Micromonas commoda
MD05G1048500 Malus domestica
MD10G1054900 Malus domestica
Medtr2g009660 Medicago truncatula
Medtr4g093660 Medicago truncatula
MELO3C018053.2 Cucumis melo
Migut.B00544 Erythranthe guttata
Nitab4.5_0000001g0270 Nicotiana tabacum
Nitab4.5_0001093g0020 Nicotiana tabacum
Nn1g05616 Nelumbo nucifera
Nn5g29836 Nelumbo nucifera
Oeu027056.1 Olea europaea
Os03g0690000 Oryza sativa ssp. japonica
Peaxi162Scf00152g00928 Petunia axillaris
PGR142G2367 Punica granatum
PGSC0003DMG400025320 Solanum tuberosum
PGSC0003DMG400039300 Solanum tuberosum
Phvul.002G213700 Phaseolus vulgaris
Potri.007G116400 Populus trichocarpa
Potri.017G042432 Populus trichocarpa
Pp3c17_23010 Physcomitrium patens
PRCOL_00002361 Prasinoderma coloniale
Prupe.8G071000 Prunus persica
Psat1g213920 Pisum sativum
Psat7g101760 Pisum sativum
PSO541G2139 Papaver somniferum
PSO675G1859 Papaver somniferum
QL11p025380 Quercus lobata
RcHm_v2.0_Chr6g0270691 Rosa chinensis
Rhsim11G0141900 Rhododendron simsii
Sabra07G0094700 Salix brachista
SalBow6G1122 Salvia bowleyana
SalBow6G4989 Salvia bowleyana
Sc05g0005550 Simmondsia chinensis
Sed0017031 Sechium edule
Sed0022924 Sechium edule
SEGI_09895 Sequoiadendron giganteum
SMO358G0255 Selaginella moellendorffii
Solyc11g044230.3 Solanum lycopersicum
Sopen11g019700 Solanum pennellii
Sp7g31370 Schrenkiella parvula
TAR628G0148 Trochodendron aralioides
THA.LOC104819510 Tarenaya hassleriana
Thecc.02G128200 Theobroma cacao
Thhalv10026671m.g Eutrema salsugineum
TWI14G0454 Tripterygium wilfordii
unitig_0.g617 Utricularia gibba
vmacro01866 Vaccinium macrocarpon
VMungo0251G1582 Vigna mungo
Zm00001eb053530 Zea mays

User provided reference genes

Program Settings