Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p27440 Brassica napus
Aa31LG3G17070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis
Ah.05g174330 Amaranthus hybridus
AL6G20520 Arabidopsis lyrata
Aqoxy6G00537 Aquilegia oxysepala
Aqoxy6G00538 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea
AT5G10070 Arabidopsis thaliana
ATR0564G484 Amborella trichopoda
Atru.chr4.281 Acer truncatum
AUR62004200 Chenopodium quinoa
AUR62004203 Chenopodium quinoa
AUR62013645 Chenopodium quinoa
AUR62013648 Chenopodium quinoa
BcaB08g37140 Brassica carinata
BcaB08g37142 Brassica carinata
BcaC04g19347 Brassica carinata
BolC9t59510H Brassica oleracea
BraA10t44795Z Brassica rapa
BraA10t44796Z Brassica rapa
C09p67500 Brassica napus
CAN.G1550.13 Capsicum annuum
CANSAT01G1323 Cannabis sativa
CARHR203220 Cardamine hirsuta
Carub.0006s0853 Capsella rubella
Ca_17709_v3 Cicer arietinum L.
CBR_g22385 Chara braunii
Cc00_g21690 Coffea canephora
CDE10G0337 Ceratophyllum demersum
CDE10G0344 Ceratophyllum demersum
Cfa002723 Carpinus fangiana
Cfa022135 Carpinus fangiana
Ciclev10027591m.g Citrus clementina
CiPaw.04G095200 Carya illinoinensis
ClCG09G014260 Citrullus lanatus
COL.COLO4_11046 Corchorus olitorius
COL.COLO4_11047 Corchorus olitorius
Cre17.g698950 Chlamydomonas reinhardtii
CsaV3_UNG186480 Cucumis sativus L.
CSS0003121 Camellia sinensis var. sinensis
DCAR_011494 Daucus carota
DCAR_011495 Daucus carota
Dinv16321 Davidia involucrata
Duzib187G0580 Durio zibethinus
ECA238G0371 Erigeron canadensis
ECA238G2930 Erigeron canadensis
EL10Ac1g00879 Beta vulgaris
Eucgr.I00376 Eucalyptus grandis
Eucgr.L02916 Eucalyptus grandis
FAN19G2878 Fragaria x ananassa
FAN26G1180 Fragaria x ananassa
FvH4_1g21690 Fragaria vesca
Glyma.05G181800 Glycine max
Glyma.08G139500 Glycine max
Gohir.A02G132900 Gossypium hirsutum
Gohir.D03G044300 Gossypium hirsutum
Gorai.003G045400 Gossypium raimondii
GSVIVG01022189001 Vitis vinifera
HanXRQChr14g0446011 Helianthus annuus
Haze_24999 Corylus avellana
Haze_25001 Corylus avellana
Haze_26963 Corylus avellana
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla
HPP92_027257 Vanilla planifolia
Lalb_Chr12g0203641 Lupinus albus
Lj2A556G28 Lonicera japonica
Lj4g0021245 Lotus japonicus
Lsat_1_v5_gn_2_67761 Lactuca sativa
Manes.13G077900 Manihot esculenta
Mapoly0168s0016 Marchantia polymorpha
MCO11G860 Micromonas commoda
MD01G1023100 Malus domestica
MD01G1023200 Malus domestica
MD15G1329600 Malus domestica
Medtr8g091510 Medicago truncatula
MELO3C017578.2 Cucumis melo
Migut.H02394 Erythranthe guttata
MSTRG.23326 Avicennia marina
Nitab4.5_0001027g0010 Nicotiana tabacum
Nitab4.5_0003396g0010 Nicotiana tabacum
Nn5g28991 Nelumbo nucifera
Oeu028389.1 Olea europaea
Os03g0195200 Oryza sativa ssp. japonica
PGR004G1063 Punica granatum
PGSC0003DMG400023383 Solanum tuberosum
Phvul.002G262800 Phaseolus vulgaris
Potri.005G080300 Populus trichocarpa
Potri.007G087000 Populus trichocarpa
Pp3c17_17150 Physcomitrium patens
PRCOL_00002914 Prasinoderma coloniale
Prupe.6G178600 Prunus persica
Psat7g053400 Pisum sativum
Psat7g089320 Pisum sativum
PSO541G5899 Papaver somniferum
PSO675G0908 Papaver somniferum
QL06p050567 Quercus lobata
RcHm_v2.0_Chr2g0115571 Rosa chinensis
Rhsim10G0156200 Rhododendron simsii
Sabra05G0065900 Salix brachista
SalBow3G1116 Salvia bowleyana
Sc23g0003650 Simmondsia chinensis
Sed0017006 Sechium edule
SEGI_11019 Sequoiadendron giganteum
SEGI_36547 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01317 Striga asiatica
SHI11626 Sapria himalayana
SHI11627 Sapria himalayana
SMO139G0021 Selaginella moellendorffii
Sopen05g033820 Solanum pennellii
Sp6g33330 Schrenkiella parvula
TAR376G0333 Trochodendron aralioides
THA.LOC104819310 Tarenaya hassleriana
Thecc.01G107900 Theobroma cacao
Thhalv10014396m.g Eutrema salsugineum
TPR.G2232 Trifolium pratense
TWI53G0226 Tripterygium wilfordii
unitig_736.g22572 Utricularia gibba
vmacro12933 Vaccinium macrocarpon
VMungo0251G3519 Vigna mungo
Zm00001eb401110 Zea mays

User provided reference genes

Program Settings