Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27660 Brassica napus
Aa31sc174G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis
Actinidia19081 Actinidia chinensis
Actinidia34959 Actinidia chinensis
Ah.11g046180 Amaranthus hybridus
AL8G24100 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea
AT5G50110 Arabidopsis thaliana
ATR0314G030 Amborella trichopoda
Atru.chr1.29 Acer truncatum
Atru.chr9.2404 Acer truncatum
AUR62008282 Chenopodium quinoa
AUR62031043 Chenopodium quinoa
BcaB01g02918 Brassica carinata
BcaC01g04830 Brassica carinata
BcaC05g25762 Brassica carinata
BolC3t15659H Brassica oleracea
BraA03t11979Z Brassica rapa
C03p33370 Brassica napus
C05p16930 Brassica napus
CAN.G853.13 Capsicum annuum
CANSAT80G0931 Cannabis sativa
CARHR258520 Cardamine hirsuta
Carub.0008s1012 Capsella rubella
Ca_21889_v3 Cicer arietinum L.
Cc04_g13570 Coffea canephora
CDE06G0478 Ceratophyllum demersum
Ciclev10021480m.g Citrus clementina
CiPaw.11G031700 Carya illinoinensis
ClCG01G014120 Citrullus lanatus
COL.COLO4_04635 Corchorus olitorius
Cpa.g.sc35.56 Carica papaya
Cre09.g394584 Chlamydomonas reinhardtii
CsaV3_1G008220 Cucumis sativus L.
CSS0018091 Camellia sinensis var. sinensis
CSS0037543 Camellia sinensis var. sinensis
DCAR_031285 Daucus carota
Dinv20697 Davidia involucrata
Duzib068G0259 Durio zibethinus
ECA232G3316 Erigeron canadensis
EL10Ac5g10829 Beta vulgaris
Eucgr.B00339 Eucalyptus grandis
FAN08G1114 Fragaria x ananassa
FAN13G2537 Fragaria x ananassa
FAN18G3891 Fragaria x ananassa
FvH4_5g16400 Fragaria vesca
Glyma.05G033800 Glycine max
Glyma.17G093302 Glycine max
Gohir.A05G415200 Gossypium hirsutum
Gohir.D04G001000 Gossypium hirsutum
Gorai.012G002000 Gossypium raimondii
GSVIVG01007824001 Vitis vinifera
HanXRQChr09g0271821 Helianthus annuus
HanXRQChr11g0328331 Helianthus annuus
Haze_07439 Corylus avellana
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla
HPP92_010835 Vanilla planifolia
Hund02710 Selenicereus undatus
Lalb_Chr07g0182571 Lupinus albus
Lj4g0003537 Lotus japonicus
Lj9C454G3 Lonicera japonica
Lsat_1_v5_gn_4_73480 Lactuca sativa
Manes.06G100700 Manihot esculenta
Mapoly0003s0145 Marchantia polymorpha
MBI14_g12785_MAGBIO Magnolia biondii
MCO15G300 Micromonas commoda
MD06G1181000 Malus domestica
MD13G1183500 Malus domestica
MD14G1186100 Malus domestica
MD14G1186900 Malus domestica
Medtr4g106410 Medicago truncatula
MELO3C002238.2 Cucumis melo
Migut.I00056 Erythranthe guttata
MSTRG.11426 Avicennia marina
Nitab4.5_0001642g0010 Nicotiana tabacum
Nitab4.5_0001642g0020 Nicotiana tabacum
Nitab4.5_0003386g0010 Nicotiana tabacum
Nn3g17016 Nelumbo nucifera
Oeu016332.2 Olea europaea
Os06g0239000 Oryza sativa ssp. japonica
Peaxi162Scf00017g02523 Petunia axillaris
PGR083G2560 Punica granatum
PGSC0003DMG400024585 Solanum tuberosum
Phvul.003G197000 Phaseolus vulgaris
Potri.012G076100 Populus trichocarpa
Potri.015G071001 Populus trichocarpa
Pp3c21_11830 Physcomitrium patens
PRCOL_00000545 Prasinoderma coloniale
Prupe.5G179000 Prunus persica
Psat0s1227g0160 Pisum sativum
PSO591G0501 Papaver somniferum
RcHm_v2.0_Chr7g0179701 Rosa chinensis
Rhsim12G0161700 Rhododendron simsii
Sabra12G0054300 Salix brachista
SalBow5G0752 Salvia bowleyana
SalBow5G4476 Salvia bowleyana
Sc12g0005660 Simmondsia chinensis
Sed0010209 Sechium edule
SEGI_15669 Sequoiadendron giganteum
SEGI_16810 Sequoiadendron giganteum
SGA_v2.0_scaffold467G52031 Striga asiatica
SMO236G0037 Selaginella moellendorffii
Solyc03g113860.2 Solanum lycopersicum
Sopen03g032910 Solanum pennellii
Sp6g11980 Schrenkiella parvula
TAR629G1196 Trochodendron aralioides
THA.LOC104809258 Tarenaya hassleriana
Thecc.03G004500 Theobroma cacao
Thhalv10014373m.g Eutrema salsugineum
TPR.G37507 Trifolium pratense
TWI81G0852 Tripterygium wilfordii
unitig_62.g23572 Utricularia gibba
vmacro16588 Vaccinium macrocarpon
VMungo1215G1861 Vigna mungo
Zm00001eb279990 Zea mays

User provided reference genes

Program Settings