Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p27650 Brassica napus
A09p40360 Brassica napus
Aa31LG7G8200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4129 Anthoceros agrestis
Actinidia19864 Actinidia chinensis
Ah.03g135280 Amaranthus hybridus
AL1G38610 Arabidopsis lyrata
AL1G41130 Arabidopsis lyrata
Aqoxy3G03336 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.251ATU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YAGN0V Arachis hypogaea
AT1G26940 Arabidopsis thaliana
ATR0684G233 Amborella trichopoda
Atru.chr11.1828 Acer truncatum
AUR62005750 Chenopodium quinoa
AUR62028810 Chenopodium quinoa
BcaC05g26368 Brassica carinata
BolC5t31137H Brassica oleracea
BolC8t49904H Brassica oleracea
BraA08t34702Z Brassica rapa
BraA09t39533Z Brassica rapa
C08p22660 Brassica napus
CAN.G38.25 Capsicum annuum
CANSAT64G2267 Cannabis sativa
CARHR024970 Cardamine hirsuta
CARHR024980 Cardamine hirsuta
Carub.0001s2404 Capsella rubella
Ca_04765_v3 Cicer arietinum L.
Cc11_g13260 Coffea canephora
CDE09G0040 Ceratophyllum demersum
Ciclev10032751m.g Citrus clementina
CiPaw.06G082900 Carya illinoinensis
ClCG11G007330 Citrullus lanatus
COL.COLO4_22979 Corchorus olitorius
Cpa.g.sc183.33 Carica papaya
Cre06.g292500 Chlamydomonas reinhardtii
CsaV3_2G010590 Cucumis sativus L.
CSS0004247 Camellia sinensis var. sinensis
CSS0005609 Camellia sinensis var. sinensis
DCAR_031032 Daucus carota
Dinv16627 Davidia involucrata
Dinv24975 Davidia involucrata
Duzib251G0137 Durio zibethinus
ECA246G2657 Erigeron canadensis
EL10Ac6g13177 Beta vulgaris
Eucgr.G02518 Eucalyptus grandis
FAN07G2562 Fragaria x ananassa
FAN12G4204 Fragaria x ananassa
FAN17G1605 Fragaria x ananassa
FAN22G1577 Fragaria x ananassa
FvH4_4g31590 Fragaria vesca
Glyma.01G044900 Glycine max
Glyma.02G105500 Glycine max
Gohir.A03G099700 Gossypium hirsutum
Gohir.D02G124600 Gossypium hirsutum
Gorai.005G140100 Gossypium raimondii
GSVIVG01020024001 Vitis vinifera
HanXRQChr17g0545181 Helianthus annuus
Haze_12032 Corylus avellana
Haze_12039 Corylus avellana
Hma1.2p1_0598F.1_g186750 Hydrangea macrophylla
Hma1.2p1_0598F.1_g186760 Hydrangea macrophylla
HPP92_016855 Vanilla planifolia
Hund25256 Selenicereus undatus
Lalb_Chr17g0340541 Lupinus albus
Lj2g0006932 Lotus japonicus
Lj6A791G23 Lonicera japonica
Lsat_1_v5_gn_3_52920 Lactuca sativa
Manes.05G099400 Manihot esculenta
Mapoly0071s0062 Marchantia polymorpha
MBI02_g34551_MAGBIO Magnolia biondii
MCO05G545 Micromonas commoda
MD13G1074200 Malus domestica
MD16G1075600 Malus domestica
Medtr5g039210 Medicago truncatula
MELO3C008553.2 Cucumis melo
MELO3C031385.2 Cucumis melo
Migut.L01314 Erythranthe guttata
MSTRG.7814 Avicennia marina
Nitab4.5_0000141g0290 Nicotiana tabacum
Nitab4.5_0003566g0030 Nicotiana tabacum
Nn4g23099 Nelumbo nucifera
Oeu028298.1 Olea europaea
Os11g0602900 Oryza sativa ssp. japonica
Peaxi162Scf00026g00297 Petunia axillaris
PGR119G2153 Punica granatum
PGSC0003DMG400000875 Solanum tuberosum
Phvul.002G088300 Phaseolus vulgaris
Potri.010G012900 Populus trichocarpa
Pp3c22_14990 Physcomitrium patens
Prupe.1G271800 Prunus persica
Psat2g127200 Pisum sativum
Psat2g127240 Pisum sativum
PSO063G1773 Papaver somniferum
PSO832G3732 Papaver somniferum
QL03p064826 Quercus lobata
RcHm_v2.0_Chr4g0440101 Rosa chinensis
Rhsim12G0061300 Rhododendron simsii
Sabra10G0008100 Salix brachista
SalBow1G1915 Salvia bowleyana
SalBow1G2824 Salvia bowleyana
SalBow2G0178 Salvia bowleyana
SalBow2G1811 Salvia bowleyana
Sc04g0004950 Simmondsia chinensis
Sed0000225 Sechium edule
Sed0010295 Sechium edule
SGA_v2.0_scaffold302G47835 Striga asiatica
SMO358G0251 Selaginella moellendorffii
Solyc01g010590.2 Solanum lycopersicum
Sopen01g006240 Solanum pennellii
Sp1g21840 Schrenkiella parvula
TAR374G0832 Trochodendron aralioides
THA.LOC104822922 Tarenaya hassleriana
Thecc.02G349100 Theobroma cacao
Thhalv10008695m.g Eutrema salsugineum
TPR.G11706 Trifolium pratense
TWI18G0776 Tripterygium wilfordii
unitig_22.g6524 Utricularia gibba
vmacro01240 Vaccinium macrocarpon
VMungo1215G0700 Vigna mungo
Zm00001eb044370 Zea mays
Zm00001eb114970 Zea mays
Zm00001eb428600 Zea mays

User provided reference genes

Program Settings