Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20280 Brassica napus
Aa31LG5G9580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis
Actinidia39601 Actinidia chinensis
Actinidia39602 Actinidia chinensis
Ah.09g228830 Amaranthus hybridus
AL4G18760 Arabidopsis lyrata
Aqoxy7G00916 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea
AT2G26210 Arabidopsis thaliana
ATR0006G021 Amborella trichopoda
Atru.chr7.1806 Acer truncatum
AUR62025324 Chenopodium quinoa
BcaNung07167 Brassica carinata
BolC4t27132H Brassica oleracea
BraA04t17607Z Brassica rapa
C04p55990 Brassica napus
CAN.G55.2 Capsicum annuum
CANSAT56G0784 Cannabis sativa
CANSAT56G3804 Cannabis sativa
CARHR115040 Cardamine hirsuta
Carub.0004s0605 Capsella rubella
Ca_21351_v3 Cicer arietinum L.
CBR_g36802 Chara braunii
Cc09_g04380 Coffea canephora
Cc09_g04390 Coffea canephora
CDE05G1274 Ceratophyllum demersum
Cfa010680 Carpinus fangiana
Ciclev10009053m.g Citrus clementina
CiPaw.03G198900 Carya illinoinensis
ClCG03G014700 Citrullus lanatus
COL.COLO4_21178 Corchorus olitorius
Cpa.g.sc82.25 Carica papaya
Cpa.g.sc82.29 Carica papaya
Cpa.g.sc82.30 Carica papaya
CsaV3_1G041470 Cucumis sativus L.
CSS0016512 Camellia sinensis var. sinensis
DCAR_010521 Daucus carota
Dinv42443 Davidia involucrata
Duzib150G1397 Durio zibethinus
Duzib168G1027 Durio zibethinus
Duzib187G0844 Durio zibethinus
EL10Ac7g16304 Beta vulgaris
EL10Ac8g18944 Beta vulgaris
Eucgr.C00754 Eucalyptus grandis
FAN19G3155 Fragaria x ananassa
FAN23G1398 Fragaria x ananassa
FAN23G2301 Fragaria x ananassa
FAN26G1998 Fragaria x ananassa
FAN26G3113 Fragaria x ananassa
FAN28G2617 Fragaria x ananassa
FvH4_1g09680 Fragaria vesca
Glyma.13G116000 Glycine max
Glyma.13G116150 Glycine max
Glyma.17G043800 Glycine max
Gohir.A08G246900 Gossypium hirsutum
Gohir.D08G268100 Gossypium hirsutum
Gorai.004G285800 Gossypium raimondii
GSVIVG01000273001 Vitis vinifera
HanXRQChr09g0258421 Helianthus annuus
Haze_03605 Corylus avellana
Hund08920 Selenicereus undatus
Lalb_Chr13g0299091 Lupinus albus
Lj4g0027818 Lotus japonicus
Lsat_1_v5_gn_5_30201 Lactuca sativa
Lsat_1_v5_gn_8_118080 Lactuca sativa
Manes.03G055100 Manihot esculenta
Mapoly0086s0040 Marchantia polymorpha
MBI13_g05966_MAGBIO Magnolia biondii
MCO12G441 Micromonas commoda
MD02G1105800 Malus domestica
MD15G1225700 Malus domestica
Medtr0259s0040 Medicago truncatula
Medtr4g036440 Medicago truncatula
Medtr4g124370 Medicago truncatula
Medtr5g081760 Medicago truncatula
Medtr8g098885 Medicago truncatula
MELO3C015558.2 Cucumis melo
Migut.J00866 Erythranthe guttata
Nitab4.5_0000987g0010 Nicotiana tabacum
Nitab4.5_0005239g0010 Nicotiana tabacum
Nn8g38504 Nelumbo nucifera
Oeu000272.2 Olea europaea
Oeu000950.1 Olea europaea
Os07g0618600 Oryza sativa ssp. japonica
PGR124G0001 Punica granatum
PGR142G0057 Punica granatum
PGSC0003DMG400015096 Solanum tuberosum
Phvul.003G125800 Phaseolus vulgaris
Potri.006G217100 Populus trichocarpa
Potri.018G047000 Populus trichocarpa
Pp3c18_11010 Physcomitrium patens
Prupe.7G189300 Prunus persica
Psat4g020160 Pisum sativum
PSO541G2149 Papaver somniferum
PSO675G5415 Papaver somniferum
QL11p003516 Quercus lobata
RcHm_v2.0_Chr2g0096541 Rosa chinensis
Rhsim05G0081000 Rhododendron simsii
Sabra06G0167400 Salix brachista
SalBow6G0039 Salvia bowleyana
SalBow6G1494 Salvia bowleyana
Sc18g0002960 Simmondsia chinensis
Sed0014627 Sechium edule
SEGI_19924 Sequoiadendron giganteum
SEGI_24061 Sequoiadendron giganteum
SGA_v2.0_scaffold318G48507 Striga asiatica
SGA_v2.0_scaffold31G12706 Striga asiatica
SMO117G0175 Selaginella moellendorffii
Solyc06g031680.2 Solanum lycopersicum
Solyc06g031690.4 Solanum lycopersicum
Sopen06g010170 Solanum pennellii
Sp4g06310 Schrenkiella parvula
TAR383G1010 Trochodendron aralioides
THA.LOC104804445 Tarenaya hassleriana
Thecc.09G067300 Theobroma cacao
Thhalv10002200m.g Eutrema salsugineum
TPR.G12541 Trifolium pratense
unitig_26.g9120 Utricularia gibba
vmacro13145 Vaccinium macrocarpon
VMungo1215G1783 Vigna mungo
Zm00001eb327610 Zea mays

User provided reference genes

Program Settings