Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04790 Brassica napus
Aa31sc146G50 Aethionema arabicum
Aa31sc146G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis
Actinidia06588 Actinidia chinensis
Actinidia20043 Actinidia chinensis
Ah.06g188920 Amaranthus hybridus
AL7G18070 Arabidopsis lyrata
Aqoxy6G00267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea
AT4G33480 Arabidopsis thaliana
ATR0138G010 Amborella trichopoda
ATR0138G020 Amborella trichopoda
Atru.chr4.1049 Acer truncatum
AUR62000533 Chenopodium quinoa
AUR62006880 Chenopodium quinoa
BcaC09g52164 Brassica carinata
BolC1t00500H Brassica oleracea
BraA01t00462Z Brassica rapa
C01p05200 Brassica napus
CAN.G676.43 Capsicum annuum
CANSAT01G0949 Cannabis sativa
CARHR241560 Cardamine hirsuta
Carub.0007s0699 Capsella rubella
Ca_16991_v3 Cicer arietinum L.
Ca_17019_v3 Cicer arietinum L.
Ca_17618_v3 Cicer arietinum L.
CBR_g51961 Chara braunii
Cc02_g33920 Coffea canephora
CDE08G1595 Ceratophyllum demersum
Cfa002190 Carpinus fangiana
Ciclev10001875m.g Citrus clementina
CiPaw.03G117200 Carya illinoinensis
CiPaw.04G078600 Carya illinoinensis
ClCG02G000090 Citrullus lanatus
COL.COLO4_12072 Corchorus olitorius
Cpa.g.sc37.17 Carica papaya
CsaV3_2G019760 Cucumis sativus L.
CSS0037144 Camellia sinensis var. sinensis
DCAR_019988 Daucus carota
Dinv30343 Davidia involucrata
Duzib147G1587 Durio zibethinus
EL10Ac4g09645 Beta vulgaris
Eucgr.I00111 Eucalyptus grandis
FAN19G1952 Fragaria x ananassa
FAN23G2617 Fragaria x ananassa
FAN26G1784 Fragaria x ananassa
FAN28G1699 Fragaria x ananassa
FAN28G2638 Fragaria x ananassa
FvH4_1g25120 Fragaria vesca
Glyma.05G194700 Glycine max
Glyma.06G156800 Glycine max
Gohir.A05G381800 Gossypium hirsutum
Gohir.D04G033500 Gossypium hirsutum
Gorai.012G037800 Gossypium raimondii
GSVIVG01022337001 Vitis vinifera
HanXRQChr15g0469261 Helianthus annuus
Haze_25362 Corylus avellana
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla
Hund07224 Selenicereus undatus
Lalb_Chr08g0238111 Lupinus albus
Lalb_Chr13g0296721 Lupinus albus
Lj1g0010918 Lotus japonicus
Lj4g0011477 Lotus japonicus
Lsat_1_v5_gn_5_69121 Lactuca sativa
Manes.12G147400 Manihot esculenta
Mapoly0149s0016 Marchantia polymorpha
MBI06_g33106_MAGBIO Magnolia biondii
MBI06_g33107_MAGBIO Magnolia biondii
MBI06_g45441_MAGBIO Magnolia biondii
MCO05G028 Micromonas commoda
MD00G1064700 Malus domestica
Medtr3g096860 Medicago truncatula
Medtr8g094200 Medicago truncatula
MELO3C023197.2 Cucumis melo
Migut.H00817 Erythranthe guttata
MSTRG.23495 Avicennia marina
Nitab4.5_0000733g0220 Nicotiana tabacum
Nitab4.5_0001663g0100 Nicotiana tabacum
Nn1g08886 Nelumbo nucifera
Nn1g08902 Nelumbo nucifera
Oeu011021.1 Olea europaea
Peaxi162Scf01713g00017 Petunia axillaris
Peaxi162Scf01713g00018 Petunia axillaris
PGR119G1413 Punica granatum
PGSC0003DMG400027234 Solanum tuberosum
Phvul.009G153500 Phaseolus vulgaris
Potri.007G099900 Populus trichocarpa
Pp3c3_32640 Physcomitrium patens
Pp3c8_1430 Physcomitrium patens
PRCOL_00004760 Prasinoderma coloniale
Prupe.4G278200 Prunus persica
Psat5g086920 Pisum sativum
Psat7g044240 Pisum sativum
PSO063G7430 Papaver somniferum
PSO170G3530 Papaver somniferum
PSO528G0185 Papaver somniferum
QL10p040847 Quercus lobata
RcHm_v2.0_Chr2g0122781 Rosa chinensis
Rhsim10G0127700 Rhododendron simsii
Sabra07G0082800 Salix brachista
Sc06g0006730 Simmondsia chinensis
Sed0013830 Sechium edule
SGA_v2.0_scaffold54G19604 Striga asiatica
Solyc04g015480.3 Solanum lycopersicum
Sopen04g007550 Solanum pennellii
Sp7g31200 Schrenkiella parvula
Sp7g31210 Schrenkiella parvula
TAR628G0816 Trochodendron aralioides
THA.LOC104804401 Tarenaya hassleriana
Thecc.01G139400 Theobroma cacao
Thhalv10025682m.g Eutrema salsugineum
TPR.G33574 Trifolium pratense
TPR.G37339 Trifolium pratense
TWI31G0808 Tripterygium wilfordii
unitig_899.g15157 Utricularia gibba
vmacro12756 Vaccinium macrocarpon
vmacro12757 Vaccinium macrocarpon
VMungo1309G1214 Vigna mungo
Zm00001eb434490 Zea mays

User provided reference genes

Program Settings