Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23650 Brassica napus
A09p66940 Brassica napus
A10p05150 Brassica napus
Aa31LG1G7590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3660 Anthoceros agrestis
Ah.06g182360 Amaranthus hybridus
AL1G16530 Arabidopsis lyrata
AL4G25910 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0361F1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40255N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4217G9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TUTF01 Arachis hypogaea
AT1G06515 Arabidopsis thaliana
AT2G30942 Arabidopsis thaliana
ATR0733G176 Amborella trichopoda
BcaB02g06800 Brassica carinata
BcaB06g28396 Brassica carinata
BcaB06g28465 Brassica carinata
BcaC07g42061 Brassica carinata
BolC4t27513H Brassica oleracea
BolC5t29247H Brassica oleracea
BolC8t52644H Brassica oleracea
BraA04t17890Z Brassica rapa
BraA09t42029Z Brassica rapa
BraA10t42782Z Brassica rapa
C04p41290 Brassica napus
C04p60100 Brassica napus
C05p04760 Brassica napus
C08p51170 Brassica napus
CAN.G358.121 Capsicum annuum
CANSAT01G0756 Cannabis sativa
CARHR006120 Cardamine hirsuta
CARHR124460 Cardamine hirsuta
Carub.0001s0587 Capsella rubella
Carub.0004s1216 Capsella rubella
Ca_07248_v3 Cicer arietinum L.
Cc07_g09230 Coffea canephora
Cc10_g03090 Coffea canephora
CDE04G3777 Ceratophyllum demersum
Ciclev10023245m.g Citrus clementina
CiPaw.07G206900 Carya illinoinensis
CiPaw.13G075100 Carya illinoinensis
CsaV3_5G038690 Cucumis sativus L.
CSS0042829 Camellia sinensis var. sinensis
CSS0043768 Camellia sinensis var. sinensis
CSS0047171 Camellia sinensis var. sinensis
CSS0047355 Camellia sinensis var. sinensis
DCAR_025932 Daucus carota
Dinv36061 Davidia involucrata
Duzib041G0253 Durio zibethinus
Duzib116G0168 Durio zibethinus
Eucgr.F04183 Eucalyptus grandis
FAN11G3335 Fragaria x ananassa
FAN11G3963 Fragaria x ananassa
FAN16G1919 Fragaria x ananassa
FAN16G2060 Fragaria x ananassa
FAN21G1628 Fragaria x ananassa
FAN25G0650 Fragaria x ananassa
FvH4_3g38980 Fragaria vesca
Glyma.05G140300 Glycine max
Glyma.08G095700 Glycine max
Gohir.A01G116600 Gossypium hirsutum
Gohir.A03G078101 Gossypium hirsutum
Gohir.D01G105000 Gossypium hirsutum
Gohir.D02G094200 Gossypium hirsutum
Gorai.002G129000 Gossypium raimondii
Gorai.005G107100 Gossypium raimondii
GSVIVG01037960001 Vitis vinifera
Hma1.2p1_0023F.1_g014910 Hydrangea macrophylla
Hma1.2p1_0203F.1_g086530 Hydrangea macrophylla
Lalb_Chr08g0232711 Lupinus albus
Lalb_Chr11g0074141 Lupinus albus
Lalb_Chr13g0293771 Lupinus albus
Lj4g0001345 Lotus japonicus
Lsat_1_v5_gn_1_26540 Lactuca sativa
Manes.05G162000 Manihot esculenta
MD03G1065900 Malus domestica
MD11G1070700 Malus domestica
MD12G1007100 Malus domestica
Medtr7g024350 Medicago truncatula
Migut.H00182 Erythranthe guttata
Migut.N00499 Erythranthe guttata
MSTRG.24295 Avicennia marina
Nitab4.5_0003410g0060 Nicotiana tabacum
Nn1g05070 Nelumbo nucifera
Oeu009866.1 Olea europaea
Oeu025460.1 Olea europaea
Os04g0518650 Oryza sativa ssp. japonica
Os07g0446600 Oryza sativa ssp. japonica
Os07g0446900 Oryza sativa ssp. japonica
Os07g0447200 Oryza sativa ssp. japonica
PGR004G0716 Punica granatum
PGSC0003DMG400015499 Solanum tuberosum
Phvul.002G183600 Phaseolus vulgaris
Potri.001G000400 Populus trichocarpa
Potri.002G263100 Populus trichocarpa
Potri.002G263300 Populus trichocarpa
Pp3c10_13010 Physcomitrium patens
Pp3c4_25750 Physcomitrium patens
Prupe.6G054600 Prunus persica
PSO017G0544 Papaver somniferum
PSO339G3417 Papaver somniferum
PSO801G0156 Papaver somniferum
QL12p026537 Quercus lobata
QL12p026562 Quercus lobata
RcHm_v2.0_Chr5g0070251 Rosa chinensis
RcHm_v2.0_Chr7g0176991 Rosa chinensis
Rhsim08G0113100 Rhododendron simsii
SalBow8G0801 Salvia bowleyana
Sed0005431 Sechium edule
SEGI_00006 Sequoiadendron giganteum
SHI24607 Sapria himalayana
TAR628G0909 Trochodendron aralioides
THA.LOC104800827 Tarenaya hassleriana
THA.LOC104815841 Tarenaya hassleriana
Thecc.08G024100 Theobroma cacao
Thhalv10009956m.g Eutrema salsugineum
TWI12G0206 Tripterygium wilfordii
TWI36G0631 Tripterygium wilfordii
unitig_85.g27236 Utricularia gibba
vmacro17857 Vaccinium macrocarpon
Zm00001eb306290 Zea mays
Zm00001eb368290 Zea mays

User provided reference genes

Program Settings