Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG6G7970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis
Actinidia29367 Actinidia chinensis
Ah.13g067720 Amaranthus hybridus
AL1G47890 Arabidopsis lyrata
AL1G48040 Arabidopsis lyrata
Aqoxy6G00041 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea
AT1G33500 Arabidopsis thaliana
ATR1204G001 Amborella trichopoda
Atru.chr13.2578 Acer truncatum
AUR62013391 Chenopodium quinoa
AUR62038542 Chenopodium quinoa
BcaB03g13696 Brassica carinata
BcaC05g27802 Brassica carinata
BolC5t32531H Brassica oleracea
BraA05t21311Z Brassica rapa
C05p38000 Brassica napus
CANSAT56G0749 Cannabis sativa
CARHR032940 Cardamine hirsuta
Carub.0001s3169 Capsella rubella
Ca_13616_v3 Cicer arietinum L.
Ca_30187_v3 Cicer arietinum L.
Cc10_g16070 Coffea canephora
CDE10G1127 Ceratophyllum demersum
Cfa008039 Carpinus fangiana
Ciclev10023084m.g Citrus clementina
Ciclev10023919m.g Citrus clementina
CiPaw.03G012800 Carya illinoinensis
ClCG11G008290 Citrullus lanatus
COL.COLO4_05044 Corchorus olitorius
COL.COLO4_05796 Corchorus olitorius
COL.COLO4_36458 Corchorus olitorius
Cpa.g.sc142.8 Carica papaya
CsaV3_2G033310 Cucumis sativus L.
CSS0025861 Camellia sinensis var. sinensis
DCAR_014062 Daucus carota
Dinv22148 Davidia involucrata
Duzib116G0864 Durio zibethinus
ECA247G1184 Erigeron canadensis
EL10Ac1g01283 Beta vulgaris
Eucgr.F04078 Eucalyptus grandis
Eucgr.F04079 Eucalyptus grandis
FAN19G0686 Fragaria x ananassa
FAN20G0885 Fragaria x ananassa
FAN20G1821 Fragaria x ananassa
FAN24G0692 Fragaria x ananassa
FAN24G3334 Fragaria x ananassa
FvH4_2g00330 Fragaria vesca
FvH4_2g04930 Fragaria vesca
Glyma.12G241400 Glycine max
Gohir.A08G228900 Gossypium hirsutum
Gohir.D08G249200 Gossypium hirsutum
Gorai.004G265800 Gossypium raimondii
HanXRQChr04g0102471 Helianthus annuus
HanXRQChr04g0102481 Helianthus annuus
HanXRQChr09g0250421 Helianthus annuus
Haze_13990 Corylus avellana
Haze_13992 Corylus avellana
Haze_13997 Corylus avellana
Haze_13999 Corylus avellana
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla
HPP92_003819 Vanilla planifolia
Hund17299 Selenicereus undatus
Lalb_Chr19g0131881 Lupinus albus
Lalb_Chr19g0131891 Lupinus albus
Lalb_Chr19g0131901 Lupinus albus
Lj3g0014137 Lotus japonicus
Lj8A308G12 Lonicera japonica
Lsat_1_v5_gn_0_19000 Lactuca sativa
Lsat_1_v5_gn_1_24541 Lactuca sativa
Manes.18G109250 Manihot esculenta
Mapoly0161s0026 Marchantia polymorpha
MBI15_g27821_MAGBIO Magnolia biondii
MBI15_g27824_MAGBIO Magnolia biondii
MD05G1006300 Malus domestica
Medtr1g067710 Medicago truncatula
Medtr1g067720 Medicago truncatula
MELO3C008102.2 Cucumis melo
Migut.C01397 Erythranthe guttata
MSTRG.1607 Avicennia marina
Nitab4.5_0000009g0490 Nicotiana tabacum
Nitab4.5_0001489g0030 Nicotiana tabacum
Nn5g27238 Nelumbo nucifera
Nn5g27242 Nelumbo nucifera
Os08g0320300 Oryza sativa ssp. japonica
Peaxi162Scf00078g01026 Petunia axillaris
PGR004G0115 Punica granatum
PGSC0003DMG401019059 Solanum tuberosum
Phvul.011G215700 Phaseolus vulgaris
Potri.013G095400 Populus trichocarpa
Prupe.8G003600 Prunus persica
Psat7g227400 Pisum sativum
PSO384G4286 Papaver somniferum
QL09p001374 Quercus lobata
RcHm_v2.0_Chr6g0249621 Rosa chinensis
Rhsim02G0172300 Rhododendron simsii
Sabra13G0081400 Salix brachista
SalBow7G4276 Salvia bowleyana
Sc01g0000050 Simmondsia chinensis
Sc01g0000180 Simmondsia chinensis
Sc01g0000190 Simmondsia chinensis
Sed0008597 Sechium edule
SGA_v2.0_scaffold118G32636 Striga asiatica
SMO137G0232 Selaginella moellendorffii
Solyc11g045100.2 Solanum lycopersicum
Sopen11g020540 Solanum pennellii
Sp1g28980 Schrenkiella parvula
TAR636G2957 Trochodendron aralioides
THA.LOC104815798 Tarenaya hassleriana
Thecc.08G168400 Theobroma cacao
Thhalv10008295m.g Eutrema salsugineum
TPR.G34175 Trifolium pratense
TWI12G0802 Tripterygium wilfordii
unitig_749.g13868 Utricularia gibba
vmacro11027 Vaccinium macrocarpon
vmacro11028 Vaccinium macrocarpon
VMungo1127G0740 Vigna mungo
Zm00001eb028220 Zea mays

User provided reference genes

Program Settings