Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03350 Brassica napus
Aa31LG1G24480 Aethionema arabicum
Actinidia03942 Actinidia chinensis
Ah.01g004980 Amaranthus hybridus
AL4G41260 Arabidopsis lyrata
Aqoxy5G02856 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7ZKY56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea
AT2G42700 Arabidopsis thaliana
ATR0796G261 Amborella trichopoda
Atru.chr6.2773 Acer truncatum
AUR62029599 Chenopodium quinoa
AUR62041733 Chenopodium quinoa
BolC4t22028H Brassica oleracea
BraA03t11594Z Brassica rapa
BraA05t19323Z Brassica rapa
C04p03920 Brassica napus
CAN.G1716.4 Capsicum annuum
CANSAT78G1126 Cannabis sativa
CARHR137800 Cardamine hirsuta
Carub.0004s2514 Capsella rubella
Ca_18866_v3 Cicer arietinum L.
CBR_g35046 Chara braunii
Cc05_g08450 Coffea canephora
CDE04G2642 Ceratophyllum demersum
Cfa021921 Carpinus fangiana
Ciclev10014241m.g Citrus clementina
CiPaw.03G194300 Carya illinoinensis
ClCG07G002720 Citrullus lanatus
COL.COLO4_33599 Corchorus olitorius
Cpa.g.c45723 Carica papaya
Cpa.g.sc52.161 Carica papaya
Cpa.g.sc52.162 Carica papaya
Cre11.g479200 Chlamydomonas reinhardtii
CsaV3_1G037360 Cucumis sativus L.
CSS0034147 Camellia sinensis var. sinensis
CSS0039339 Camellia sinensis var. sinensis
DCAR_013276 Daucus carota
Dinv07684 Davidia involucrata
Dinv07685 Davidia involucrata
Duzib147G0397 Durio zibethinus
ECA248G1772 Erigeron canadensis
EL10Ac9g20963 Beta vulgaris
Eucgr.K01140 Eucalyptus grandis
FAN02G4134 Fragaria x ananassa
FAN05G5099 Fragaria x ananassa
FAN09G2536 Fragaria x ananassa
FAN14G1437 Fragaria x ananassa
FvH4_6g27600 Fragaria vesca
Glyma.06G276100 Glycine max
Glyma.12G129300 Glycine max
Gohir.A09G003200 Gossypium hirsutum
Gohir.D09G003000 Gossypium hirsutum
Gorai.006G003700 Gossypium raimondii
GSVIVG01020726001 Vitis vinifera
HanXRQChr09g0251831 Helianthus annuus
Haze_13408 Corylus avellana
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla
HPP92_014652 Vanilla planifolia
Hund07777 Selenicereus undatus
Lalb_Chr24g0400131 Lupinus albus
Lj3g0027149 Lotus japonicus
Lj8C100T15 Lonicera japonica
Lsat_1_v5_gn_4_64481 Lactuca sativa
Manes.07G057100 Manihot esculenta
Mapoly0047s0091 Marchantia polymorpha
MBI16_g39629_MAGBIO Magnolia biondii
MCO09G591 Micromonas commoda
MD11G1004500 Malus domestica
Medtr4g080110 Medicago truncatula
MELO3C002806.2 Cucumis melo
Migut.M00272 Erythranthe guttata
Nitab4.5_0002027g0190 Nicotiana tabacum
Nitab4.5_0006142g0020 Nicotiana tabacum
Nn8g40464 Nelumbo nucifera
Oeu001793.2 Olea europaea
Os11g0169100 Oryza sativa ssp. japonica
Peaxi162Scf00229g01116 Petunia axillaris
PGR142G2695 Punica granatum
PGSC0003DMG400015368 Solanum tuberosum
Phvul.011G128400 Phaseolus vulgaris
Potri.014G142900 Populus trichocarpa
Pp3c9_21860 Physcomitrium patens
PRCOL_00003865 Prasinoderma coloniale
Prupe.3G115700 Prunus persica
Psat7g163800 Pisum sativum
PSO478G4451 Papaver somniferum
PSO782G3259 Papaver somniferum
QL08p042146 Quercus lobata
RcHm_v2.0_Chr2g0130091 Rosa chinensis
Rhsim04G0074900 Rhododendron simsii
Sabra14G0108000 Salix brachista
SalBow7G4578 Salvia bowleyana
Sc12g0003550 Simmondsia chinensis
Sed0011358 Sechium edule
SEGI_27047 Sequoiadendron giganteum
SEGI_32298 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04837 Striga asiatica
SMO164G0050 Selaginella moellendorffii
Solyc01g011180.1 Solanum lycopersicum
Solyc01g011190.1 Solanum lycopersicum
Solyc12g013950.2 Solanum lycopersicum
Sopen12g005700 Solanum pennellii
Sp4g24850 Schrenkiella parvula
TAR629G0105 Trochodendron aralioides
TAR629G2876 Trochodendron aralioides
TAR636G1540 Trochodendron aralioides
THA.LOC104823853 Tarenaya hassleriana
Thecc.01G152700 Theobroma cacao
Thhalv10016247m.g Eutrema salsugineum
TPR.G13821 Trifolium pratense
TPR.G16532 Trifolium pratense
TWI38G0436 Tripterygium wilfordii
unitig_46.g18270 Utricularia gibba
unitig_46.g18272 Utricularia gibba
vmacro09212 Vaccinium macrocarpon
VMungo1127G1883 Vigna mungo
VMungo1127G1894 Vigna mungo
Zm00001eb297610 Zea mays

User provided reference genes

Program Settings