Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18940 Brassica napus
Aa31LG10G2470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis
Actinidia15748 Actinidia chinensis
Ah.08g214330 Amaranthus hybridus
AL1G60780 Arabidopsis lyrata
Aqoxy7G02198 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea
AT1G52530 Arabidopsis thaliana
ATR0068G037 Amborella trichopoda
ATR0605G102 Amborella trichopoda
Atru.chr1.2888 Acer truncatum
AUR62002633 Chenopodium quinoa
AUR62030047 Chenopodium quinoa
BcaB02g10986 Brassica carinata
BcaC08g44001 Brassica carinata
BolC6t36584H Brassica oleracea
BraA05t20791Z Brassica rapa
C06p14060 Brassica napus
CAN.G407.9 Capsicum annuum
CANSAT56G2592 Cannabis sativa
CARHR042650 Cardamine hirsuta
Carub.0001s4149 Capsella rubella
Ca_04862_v3 Cicer arietinum L.
CBR_g8656 Chara braunii
Cc04_g04540 Coffea canephora
CDE08G0717 Ceratophyllum demersum
CDE11G1201 Ceratophyllum demersum
Cfa001948 Carpinus fangiana
Ciclev10026100m.g Citrus clementina
Ciclev10026188m.g Citrus clementina
Ciclev10026990m.g Citrus clementina
Ciclev10027054m.g Citrus clementina
Ciclev10027055m.g Citrus clementina
Ciclev10027056m.g Citrus clementina
Ciclev10027064m.g Citrus clementina
Ciclev10027407m.g Citrus clementina
Ciclev10027493m.g Citrus clementina
Ciclev10027644m.g Citrus clementina
CiPaw.01G249400 Carya illinoinensis
COL.COLO4_11906 Corchorus olitorius
Cpa.g.sc67.28 Carica papaya
Cre12.g524350 Chlamydomonas reinhardtii
CsaV3_7G032300 Cucumis sativus L.
CSS0005655 Camellia sinensis var. sinensis
CSS0043074 Camellia sinensis var. sinensis
DCAR_021353 Daucus carota
Dinv38132 Davidia involucrata
Duzib160G0598 Durio zibethinus
Duzib160G0645 Durio zibethinus
Duzib235G0689 Durio zibethinus
ECA232G3059 Erigeron canadensis
EL10Ac7g17638 Beta vulgaris
FAN02G0099 Fragaria x ananassa
FAN09G0903 Fragaria x ananassa
FvH4_6g29440 Fragaria vesca
Glyma.13G059800 Glycine max
Gohir.A06G107700 Gossypium hirsutum
Gohir.D06G120300 Gossypium hirsutum
Gorai.010G138400 Gossypium raimondii
GSVIVG01017366001 Vitis vinifera
HanXRQChr16g0500351 Helianthus annuus
Haze_13452 Corylus avellana
HPP92_007331 Vanilla planifolia
HPP92_007333 Vanilla planifolia
Lalb_Chr06g0175141 Lupinus albus
Lj2g0016250 Lotus japonicus
Lj9E498T1 Lonicera japonica
Lsat_1_v5_gn_4_87520 Lactuca sativa
Manes.11G058300 Manihot esculenta
Mapoly0090s0026 Marchantia polymorpha
Mapoly1721s0002 Marchantia polymorpha
MBI06_g17213_MAGBIO Magnolia biondii
MBI08_g32097_MAGBIO Magnolia biondii
MCO05G139 Micromonas commoda
MD17G1214300 Malus domestica
Medtr1g082730 Medicago truncatula
MELO3C023430.2 Cucumis melo
Migut.I00752 Erythranthe guttata
MSTRG.11150 Avicennia marina
Nitab4.5_0005461g0020 Nicotiana tabacum
Nitab4.5_0010868g0010 Nicotiana tabacum
Nn4g24996 Nelumbo nucifera
Oeu027841.1 Olea europaea
Os04g0528400 Oryza sativa ssp. japonica
Peaxi162Scf00553g00510 Petunia axillaris
PGR031G2298 Punica granatum
PGSC0003DMG400014148 Solanum tuberosum
Phvul.004G032600 Phaseolus vulgaris
Potri.001G201700 Populus trichocarpa
Pp3c1_24880 Physcomitrium patens
PRCOL_00003381 Prasinoderma coloniale
Prupe.2G072500 Prunus persica
Prupe.3G090200 Prunus persica
Psat1g070040 Pisum sativum
PSO210G7208 Papaver somniferum
RcHm_v2.0_Chr2g0134931 Rosa chinensis
Rhsim08G0211600 Rhododendron simsii
Sabra01G0159300 Salix brachista
SalBow2G1795 Salvia bowleyana
Sc05g0005410 Simmondsia chinensis
Sed0005275 Sechium edule
SEGI_33428 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14756 Striga asiatica
SHI11239 Sapria himalayana
SMO018G0003 Selaginella moellendorffii
SMO115G0207 Selaginella moellendorffii
Solyc03g117530.1 Solanum lycopersicum
Solyc04g026070.1 Solanum lycopersicum
Solyc08g044480.1 Solanum lycopersicum
Sopen03g036430 Solanum pennellii
Sp1g39080 Schrenkiella parvula
TAR371G0436 Trochodendron aralioides
THA.LOC104818016 Tarenaya hassleriana
Thecc.06G030600 Theobroma cacao
Thhalv10011665m.g Eutrema salsugineum
TPR.G16552 Trifolium pratense
TWI75G0153 Tripterygium wilfordii
unitig_62.g23595 Utricularia gibba
vmacro19011 Vaccinium macrocarpon
VMungo0464G1487 Vigna mungo
Zm00001eb427100 Zea mays

User provided reference genes

Program Settings