Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14290 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis
Actinidia22724 Actinidia chinensis
Actinidia27329 Actinidia chinensis
Ah.12g052370 Amaranthus hybridus
Ah.12g052380 Amaranthus hybridus
AL2G10510 Arabidopsis lyrata
Aqoxy7G00141 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea
AT1G64355 Arabidopsis thaliana
Atru.chr4.2141 Acer truncatum
Atru.chr9.2018 Acer truncatum
Atru.chr9.2021 Acer truncatum
AUR62010820 Chenopodium quinoa
AUR62019819 Chenopodium quinoa
BcaB07g31509 Brassica carinata
BcaB07g31511 Brassica carinata
BcaC04g22628 Brassica carinata
BcaC04g22630 Brassica carinata
BolC9t54619H Brassica oleracea
BraA09t37076Z Brassica rapa
C09p17200 Brassica napus
CAN.G792.46 Capsicum annuum
CANSAT21G0520 Cannabis sativa
CARHR046590 Cardamine hirsuta
Carub.0002s0043 Capsella rubella
Ca_17489_v3 Cicer arietinum L.
CBR_g30621 Chara braunii
Cc08_g15900 Coffea canephora
Cfa022928 Carpinus fangiana
Ciclev10022489m.g Citrus clementina
CiPaw.11G123100 Carya illinoinensis
ClCG01G001980 Citrullus lanatus
COL.COLO4_10669 Corchorus olitorius
COL.COLO4_10671 Corchorus olitorius
Cpa.g.sc79.61 Carica papaya
Cre08.g376450 Chlamydomonas reinhardtii
CsaV3_5G002110 Cucumis sativus L.
CSS0007891 Camellia sinensis var. sinensis
DCAR_005033 Daucus carota
Dinv37544 Davidia involucrata
Duzib068G1433 Durio zibethinus
Duzib205G0456 Durio zibethinus
ECA233G1307 Erigeron canadensis
EL10Ac5g12897 Beta vulgaris
Eucgr.E00849 Eucalyptus grandis
FAN04G2094 Fragaria x ananassa
FAN08G0187 Fragaria x ananassa
FAN13G2672 Fragaria x ananassa
FAN18G2585 Fragaria x ananassa
FAN18G4356 Fragaria x ananassa
FvH4_5g04360 Fragaria vesca
Glyma.05G215800 Glycine max
Gohir.A08G100000 Gossypium hirsutum
Gohir.D08G131800 Gossypium hirsutum
Gorai.004G134700 Gossypium raimondii
GSVIVG01019510001 Vitis vinifera
HanXRQChr09g0256331 Helianthus annuus
Haze_08636 Corylus avellana
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla
HPP92_004586 Vanilla planifolia
Hund11400 Selenicereus undatus
Lalb_Chr05g0224191 Lupinus albus
Lj2C170T10 Lonicera japonica
Lj4g0012209 Lotus japonicus
Lsat_1_v5_gn_6_12120 Lactuca sativa
Manes.02G011600 Manihot esculenta
Mapoly0049s0020 Marchantia polymorpha
MBI07_g24349_MAGBIO Magnolia biondii
MCO14G438 Micromonas commoda
MD06G1104000 Malus domestica
MD14G1122900 Malus domestica
Medtr8g099345 Medicago truncatula
MELO3C005743.2 Cucumis melo
Migut.A00672 Erythranthe guttata
Migut.E01245 Erythranthe guttata
MSTRG.25662 Avicennia marina
Nitab4.5_0002944g0130 Nicotiana tabacum
Nitab4.5_0006656g0030 Nicotiana tabacum
Nn3g19061 Nelumbo nucifera
Oeu009949.1 Olea europaea
Peaxi162Scf00102g01748 Petunia axillaris
PGR042G3674 Punica granatum
PGSC0003DMG400005788 Solanum tuberosum
Phvul.002G297000 Phaseolus vulgaris
Potri.001G093001 Populus trichocarpa
Potri.003G138500 Populus trichocarpa
Pp3c8_24130 Physcomitrium patens
Prupe.5G116900 Prunus persica
Psat7g027120 Pisum sativum
PSO135G1023 Papaver somniferum
PSO384G3305 Papaver somniferum
QL02p031049 Quercus lobata
RcHm_v2.0_Chr7g0195201 Rosa chinensis
Rhsim07G0083200 Rhododendron simsii
Sabra03G0099700 Salix brachista
SalBow1G7260 Salvia bowleyana
SalBow1G8172 Salvia bowleyana
SalBow8G4809 Salvia bowleyana
Sc01g0010190 Simmondsia chinensis
Sed0001613 Sechium edule
Sed0024637 Sechium edule
SEGI_03665 Sequoiadendron giganteum
SEGI_07201 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35857 Striga asiatica
SGA_v2.0_scaffold305G47943 Striga asiatica
Solyc08g008270.4 Solanum lycopersicum
Sopen08g004120 Solanum pennellii
Sp2g00400 Schrenkiella parvula
TAR374G0759 Trochodendron aralioides
TAR374G1465 Trochodendron aralioides
THA.LOC104809338 Tarenaya hassleriana
Thecc.03G294700 Theobroma cacao
Thhalv10023703m.g Eutrema salsugineum
TPR.G3451 Trifolium pratense
TWI60G0228 Tripterygium wilfordii
unitig_46.g18618 Utricularia gibba
vmacro13905 Vaccinium macrocarpon
VMungo0251G3563 Vigna mungo
Zm00001eb150250 Zea mays
Zm00001eb296420 Zea mays

User provided reference genes

Program Settings