Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41090 Brassica napus
A03p62810 Brassica napus
Aa31LG11G2680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis
Actinidia13714 Actinidia chinensis
AL6G34450 Arabidopsis lyrata
Aqoxy3G00285 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea
AT5G23220 Arabidopsis thaliana
AT5G23230 Arabidopsis thaliana
ATR0618G206 Amborella trichopoda
AUR62017708 Chenopodium quinoa
AUR62032973 Chenopodium quinoa
BcaB07g29862 Brassica carinata
BcaC03g13135 Brassica carinata
BcaC03g18032 Brassica carinata
BolC2t12145H Brassica oleracea
BraA02t09053Z Brassica rapa
BraA03t15356Z Brassica rapa
C02p60950 Brassica napus
CAN.G2.1 Capsicum annuum
CAN.G655.2 Capsicum annuum
CANSAT01G2706 Cannabis sativa
CARHR190310 Cardamine hirsuta
Carub.0006s2100 Capsella rubella
Ca_05122_v3 Cicer arietinum L.
Ca_29435_v3 Cicer arietinum L.
CBR_g16977 Chara braunii
CBR_g58795 Chara braunii
Cc02_g20760 Coffea canephora
Cfa008745 Carpinus fangiana
Cfa021425 Carpinus fangiana
Cfa024118 Carpinus fangiana
Cfa026003 Carpinus fangiana
Ciclev10032745m.g Citrus clementina
CiPaw.06G061000 Carya illinoinensis
ClCG02G014040 Citrullus lanatus
COL.COLO4_06169 Corchorus olitorius
COL.COLO4_33044 Corchorus olitorius
Cpa.g.sc92.93 Carica papaya
Cre06.g305500 Chlamydomonas reinhardtii
Cre10.g448500 Chlamydomonas reinhardtii
Cre17.g706800 Chlamydomonas reinhardtii
CSS0024171 Camellia sinensis var. sinensis
DCAR_026894 Daucus carota
Duzib132G0016 Durio zibethinus
Duzib132G0405 Durio zibethinus
ECA236G1709 Erigeron canadensis
EL10Ac9g22960 Beta vulgaris
FAN07G1092 Fragaria x ananassa
FAN12G4256 Fragaria x ananassa
FAN19G2684 Fragaria x ananassa
FvH4_1g26430 Fragaria vesca
FvH4_4g37050 Fragaria vesca
Glyma.09G283200 Glycine max
Gohir.A03G165200 Gossypium hirsutum
Gohir.D02G188400 Gossypium hirsutum
Gorai.005G211100 Gossypium raimondii
GSVIVG01026240001 Vitis vinifera
Haze_11761 Corylus avellana
HPP92_005057 Vanilla planifolia
Lalb_Chr04g0258971 Lupinus albus
Lalb_Chr10g0094911 Lupinus albus
Lj2g0027544 Lotus japonicus
Lj6P712T24 Lonicera japonica
Lj6P717T75 Lonicera japonica
Lsat_1_v5_gn_8_80081 Lactuca sativa
Manes.15G079500 Manihot esculenta
Mapoly0180s0008 Marchantia polymorpha
MBI06_g20294_MAGBIO Magnolia biondii
MCO09G247 Micromonas commoda
MCO09G426 Micromonas commoda
MCO13G030 Micromonas commoda
MD16G1003500 Malus domestica
Medtr1g037830 Medicago truncatula
Medtr1g037850 Medicago truncatula
Medtr1g038520 Medicago truncatula
Medtr1g038530 Medicago truncatula
Migut.H01291 Erythranthe guttata
MSTRG.12232 Avicennia marina
Nitab4.5_0000069g0350 Nicotiana tabacum
Nitab4.5_0004301g0030 Nicotiana tabacum
Nn4g24968 Nelumbo nucifera
Nn5g28518 Nelumbo nucifera
Nn6g33750 Nelumbo nucifera
Oeu012342.1 Olea europaea
Os04g0525800 Oryza sativa ssp. japonica
Peaxi162Scf00021g01915 Petunia axillaris
PGR044G1944 Punica granatum
PGSC0003DMG400016411 Solanum tuberosum
Phvul.003G004400 Phaseolus vulgaris
Potri.003G003300 Populus trichocarpa
Pp3c12_9010 Physcomitrium patens
Pp3s30_567 Physcomitrium patens
Pp3s30_680 Physcomitrium patens
PRCOL_00006077 Prasinoderma coloniale
Prupe.1G348500 Prunus persica
Psat6g099520 Pisum sativum
QL03p017519 Quercus lobata
QL03p017736 Quercus lobata
QL04p029592 Quercus lobata
RcHm_v2.0_Chr4g0446811 Rosa chinensis
Rhsim05G0006600 Rhododendron simsii
Sc06g0006830 Simmondsia chinensis
Sed0001124 Sechium edule
SEGI_40434 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18416 Striga asiatica
SHI02178 Sapria himalayana
SMO116G0488 Selaginella moellendorffii
Solyc01g007920.2 Solanum lycopersicum
Sopen01g003460 Solanum pennellii
Sp2g23920 Schrenkiella parvula
TAR622G0494 Trochodendron aralioides
TAR622G1217 Trochodendron aralioides
THA.LOC104800852 Tarenaya hassleriana
Thecc.02G158700 Theobroma cacao
Thhalv10005281m.g Eutrema salsugineum
TPR.G29797 Trifolium pratense
unitig_578.g16567 Utricularia gibba
vmacro04318 Vaccinium macrocarpon
vmacro15630 Vaccinium macrocarpon
Zm00001eb076800 Zea mays

User provided reference genes

Program Settings