Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p61670 Brassica napus
A08p17840 Brassica napus
Aa31LG2G18050 Aethionema arabicum
Actinidia18207 Actinidia chinensis
Ah.10g034670 Amaranthus hybridus
AL7G18780 Arabidopsis lyrata
Aqoxy6G00985 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea
AT4G32915 Arabidopsis thaliana
ATR0304G027 Amborella trichopoda
ATR0749G075 Amborella trichopoda
Atru.chr7.2042 Acer truncatum
AUR62009213 Chenopodium quinoa
AUR62040211 Chenopodium quinoa
BcaB03g12770 Brassica carinata
BcaNung02143 Brassica carinata
BolC3t20984H Brassica oleracea
BolC7t46384H Brassica oleracea
BraA03t15206Z Brassica rapa
BraA08t33734Z Brassica rapa
C03p86910 Brassica napus
C07p59400 Brassica napus
CAN.G162.59 Capsicum annuum
CANSAT54G2618 Cannabis sativa
CARHR240920 Cardamine hirsuta
Carub.0007s0757 Capsella rubella
Ca_10596_v3 Cicer arietinum L.
CBR_g31997 Chara braunii
Cc08_g10030 Coffea canephora
CDE10G0177 Ceratophyllum demersum
CDE10G1018 Ceratophyllum demersum
Cfa005390 Carpinus fangiana
Ciclev10009788m.g Citrus clementina
CiPaw.08G027800 Carya illinoinensis
ClCG11G014990 Citrullus lanatus
COL.COLO4_21011 Corchorus olitorius
Cpa.g.sc27.217 Carica papaya
CsaV3_3G048400 Cucumis sativus L.
CSS0007660 Camellia sinensis var. sinensis
CSS0028638 Camellia sinensis var. sinensis
CSS0049899 Camellia sinensis var. sinensis
DCAR_003057 Daucus carota
Dinv27945 Davidia involucrata
Duzib168G0301 Durio zibethinus
ECA246G5018 Erigeron canadensis
EL10Ac2g03958 Beta vulgaris
EL10Ac6g14158 Beta vulgaris
Eucgr.C00622 Eucalyptus grandis
FAN15G0473 Fragaria x ananassa
FAN27G1249 Fragaria x ananassa
FvH4_2g35131 Fragaria vesca
Glyma.10G214200 Glycine max
Glyma.20G177400 Glycine max
Gohir.A07G022176 Gossypium hirsutum
Gohir.D07G023800 Gossypium hirsutum
Gorai.001G024500 Gossypium raimondii
GSVIVG01035327001 Vitis vinifera
HanXRQChr17g0538891 Helianthus annuus
Haze_01965 Corylus avellana
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla
HPP92_013944 Vanilla planifolia
Hund19485 Selenicereus undatus
Lalb_Chr06g0162131 Lupinus albus
Lj5g0021165 Lotus japonicus
Lsat_1_v5_gn_3_27161 Lactuca sativa
Manes.03G057500 Manihot esculenta
Mapoly0154s0030 Marchantia polymorpha
MBI13_g05466_MAGBIO Magnolia biondii
MBI13_g38674_MAGBIO Magnolia biondii
MBI14_g37366_MAGBIO Magnolia biondii
MD08G1108800 Malus domestica
Medtr1g095920 Medicago truncatula
MELO3C003479.2 Cucumis melo
Migut.A00169 Erythranthe guttata
Migut.E01547 Erythranthe guttata
MSTRG.11681 Avicennia marina
Nitab4.5_0000318g0100 Nicotiana tabacum
Nitab4.5_0002021g0040 Nicotiana tabacum
Nn8g39006 Nelumbo nucifera
Nn8g40951 Nelumbo nucifera
Oeu011793.1 Olea europaea
Os03g0651000 Oryza sativa ssp. japonica
Peaxi162Scf00840g00427 Petunia axillaris
PGR031G1870 Punica granatum
PGSC0003DMG400012416 Solanum tuberosum
Phvul.007G091500 Phaseolus vulgaris
Potri.018G058200 Populus trichocarpa
Pp3c2_33430 Physcomitrium patens
PRCOL_00005999 Prasinoderma coloniale
Prupe.1G443400 Prunus persica
Psat6g186080 Pisum sativum
PSO210G1815 Papaver somniferum
PSO210G2909 Papaver somniferum
QL12p040844 Quercus lobata
RcHm_v2.0_Chr6g0306821 Rosa chinensis
Rhsim05G0006000 Rhododendron simsii
Rhsim07G0144900 Rhododendron simsii
Sabra18G0054600 Salix brachista
SalBow1G7152 Salvia bowleyana
Sc09g0009540 Simmondsia chinensis
Sed0009640 Sechium edule
Sed0025405 Sechium edule
SEGI_35319 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38048 Striga asiatica
SGA_v2.0_scaffold169G38673 Striga asiatica
SMO146G0150 Selaginella moellendorffii
Solyc07g063140.1 Solanum lycopersicum
Sopen07g031330 Solanum pennellii
Sp7g30690 Schrenkiella parvula
TAR636G3582 Trochodendron aralioides
THA.LOC104803742 Tarenaya hassleriana
Thecc.09G049300 Theobroma cacao
Thhalv10026449m.g Eutrema salsugineum
TPR.G11934 Trifolium pratense
TPR.G1790 Trifolium pratense
TWI32G0413 Tripterygium wilfordii
TWI34G0384 Tripterygium wilfordii
unitig_32.g11478 Utricularia gibba
vmacro08276 Vaccinium macrocarpon
VMungo0720G1877 Vigna mungo
Zm00001eb218450 Zea mays

User provided reference genes

Program Settings