Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36780 Brassica napus
A10p03080 Brassica napus
Aa31LG1G20220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis
Actinidia25080 Actinidia chinensis
Ah.04g153340 Amaranthus hybridus
AL1G14360 Arabidopsis lyrata
Aqoxy2G03837 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea
AT1G04650 Arabidopsis thaliana
ATR0787G047 Amborella trichopoda
Atru.chr4.1801 Acer truncatum
Atru.chr4.1802 Acer truncatum
AUR62035934 Chenopodium quinoa
BcaC07g36892 Brassica carinata
BcaC07g36900 Brassica carinata
BolC8t46943H Brassica oleracea
BraA08t35581Z Brassica rapa
BraA10t42581Z Brassica rapa
C05p02840 Brassica napus
C05p02850 Brassica napus
C07p03480 Brassica napus
C08p01350 Brassica napus
CAN.G1552.5 Capsicum annuum
CANSAT78G0108 Cannabis sativa
CARHR004030 Cardamine hirsuta
Carub.0001s0390 Capsella rubella
Ca_10406_v3 Cicer arietinum L.
CBR_g61877 Chara braunii
Cc03_g07180 Coffea canephora
CDE04G0311 Ceratophyllum demersum
Cfa014875 Carpinus fangiana
Ciclev10004244m.g Citrus clementina
CiPaw.01G204100 Carya illinoinensis
ClCG05G003620 Citrullus lanatus
COL.COLO4_34090 Corchorus olitorius
Cpa.g.sc59.86 Carica papaya
CsaV3_3G011330 Cucumis sativus L.
CSS0015325 Camellia sinensis var. sinensis
DCAR_002278 Daucus carota
Dinv38285 Davidia involucrata
Duzib212G0418 Durio zibethinus
ECA233G5226 Erigeron canadensis
EL10Ac3g06781 Beta vulgaris
Eucgr.H00098 Eucalyptus grandis
FAN04G1956 Fragaria x ananassa
FAN07G0933 Fragaria x ananassa
FAN12G2087 Fragaria x ananassa
FAN17G1964 Fragaria x ananassa
FAN22G2187 Fragaria x ananassa
FvH4_4g05680 Fragaria vesca
Glyma.10G192800 Glycine max
Glyma.20G197700 Glycine max
Gohir.D02G102900 Gossypium hirsutum
Gohir.D09G053008 Gossypium hirsutum
Gorai.006G055600 Gossypium raimondii
GSVIVG01029042001 Vitis vinifera
HanXRQChr01g0013451 Helianthus annuus
HanXRQChr07g0185861 Helianthus annuus
Haze_11549 Corylus avellana
HPP92_025559 Vanilla planifolia
HPP92_025560 Vanilla planifolia
Hund24849 Selenicereus undatus
Lalb_Chr21g0312661 Lupinus albus
Lj5g0018955 Lotus japonicus
Lju414A5G29 Lonicera japonica
Lju414A5T31 Lonicera japonica
Lsat_1_v5_gn_6_62680 Lactuca sativa
Manes.15G049000 Manihot esculenta
Mapoly0061s0085 Marchantia polymorpha
MBI10_g16832_MAGBIO Magnolia biondii
MD00G1101100 Malus domestica
Medtr1g090050 Medicago truncatula
MELO3C006341.2 Cucumis melo
Migut.N00332 Erythranthe guttata
Migut.N00333 Erythranthe guttata
MSTRG.24638 Avicennia marina
Nitab4.5_0000493g0030 Nicotiana tabacum
Nitab4.5_0000493g0050 Nicotiana tabacum
Nitab4.5_0012325g0010 Nicotiana tabacum
Nn1g03104 Nelumbo nucifera
Oeu051651.1 Olea europaea
Os03g0144000 Oryza sativa ssp. japonica
Peaxi162Scf00047g01324 Petunia axillaris
PGR142G2376 Punica granatum
PGSC0003DMG400029639 Solanum tuberosum
Phvul.007G134600 Phaseolus vulgaris
Potri.001G053000 Populus trichocarpa
Potri.003G175300 Populus trichocarpa
Pp3c16_18660 Physcomitrium patens
Prupe.1G060300 Prunus persica
Psat6g170280 Pisum sativum
PSO017G3024 Papaver somniferum
PSO063G2396 Papaver somniferum
QL05p063761 Quercus lobata
QL05p063769 Quercus lobata
RcHm_v2.0_Chr4g0396881 Rosa chinensis
Rhsim09G0049100 Rhododendron simsii
Rhsim09G0049200 Rhododendron simsii
Sabra01G0037500 Salix brachista
SalBow3G2597 Salvia bowleyana
Sc14g0004710 Simmondsia chinensis
Sed0001454 Sechium edule
SEGI_21616 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00843 Striga asiatica
SHI00019 Sapria himalayana
SMO117G0361 Selaginella moellendorffii
Solyc09g091370.4 Solanum lycopersicum
Sopen09g034300 Solanum pennellii
Sp1g03490 Schrenkiella parvula
TAR365G0379 Trochodendron aralioides
TAR365G0557 Trochodendron aralioides
THA.LOC104816017 Tarenaya hassleriana
Thecc.04G212600 Theobroma cacao
Thhalv10006668m.g Eutrema salsugineum
TPR.G13408 Trifolium pratense
TWI09G1643 Tripterygium wilfordii
unitig_899.g15531 Utricularia gibba
vmacro00516 Vaccinium macrocarpon
vmacro22821 Vaccinium macrocarpon
VMungo0720G0701 Vigna mungo
Zm00001eb003580 Zea mays

User provided reference genes

Program Settings