Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12810 Brassica napus
Aa31LG6G3500 Aethionema arabicum
Actinidia11810 Actinidia chinensis
Actinidia24058 Actinidia chinensis
Ah.09g236140 Amaranthus hybridus
AL6G48620 Arabidopsis lyrata
AL7G32570 Arabidopsis lyrata
Aqoxy1G03879 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea
AT4G05018 Arabidopsis thaliana
AT4G21500 Arabidopsis thaliana
ATR0693G170 Amborella trichopoda
Atru.chr10.2014 Acer truncatum
BcaNung02794 Brassica carinata
BolC1t01497H Brassica oleracea
BraA01t01225Z Brassica rapa
C01p15430 Brassica napus
CANSAT56G1095 Cannabis sativa
CARHR228160 Cardamine hirsuta
Carub.0007s1992 Capsella rubella
Ca_00252_v3 Cicer arietinum L.
Ca_18481_v3 Cicer arietinum L.
Cc02_g12410 Coffea canephora
CDE05G2026 Ceratophyllum demersum
CDE05G2620 Ceratophyllum demersum
Cfa000350 Carpinus fangiana
Ciclev10016271m.g Citrus clementina
CiPaw.09G157800 Carya illinoinensis
ClCG01G022550 Citrullus lanatus
COL.COLO4_31586 Corchorus olitorius
Cpa.g.sc27.128 Carica papaya
CsaV3_6G049740 Cucumis sativus L.
CSS0009661 Camellia sinensis var. sinensis
DCAR_004139 Daucus carota
Duzib235G1194 Durio zibethinus
ECA234G0536 Erigeron canadensis
EL10Ac8g20532 Beta vulgaris
FAN11G1020 Fragaria x ananassa
FAN16G2112 Fragaria x ananassa
FAN21G2539 Fragaria x ananassa
FAN25G3184 Fragaria x ananassa
FvH4_3g03970 Fragaria vesca
Glyma.08G059200 Glycine max
Glyma.13G246500 Glycine max
Glyma.15G067400 Glycine max
Gohir.A10G021000 Gossypium hirsutum
Gohir.D06G211933 Gossypium hirsutum
Gohir.D09G070600 Gossypium hirsutum
Gohir.D10G021800 Gossypium hirsutum
Gorai.006G085300 Gossypium raimondii
Gorai.010G254200 Gossypium raimondii
Gorai.011G022900 Gossypium raimondii
GSVIVG01003184001 Vitis vinifera
HanXRQChr08g0224091 Helianthus annuus
HanXRQChr16g0517421 Helianthus annuus
Haze_06575 Corylus avellana
Haze_06576 Corylus avellana
HPP92_000917 Vanilla planifolia
HPP92_012357 Vanilla planifolia
Lalb_Chr20g0122301 Lupinus albus
Lj1P1213T18 Lonicera japonica
Lj4g0025313 Lotus japonicus
Lj6g0020154 Lotus japonicus
Lsat_1_v5_gn_4_56921 Lactuca sativa
Manes.16G020500 Manihot esculenta
Manes.17G039100 Manihot esculenta
MD05G1325600 Malus domestica
MD10G1303500 Malus domestica
Medtr2g011760 Medicago truncatula
Medtr4g091220 Medicago truncatula
MELO3C007322.2 Cucumis melo
Migut.M01215 Erythranthe guttata
MSTRG.15936 Avicennia marina
MSTRG.7289 Avicennia marina
Nitab4.5_0000190g0060 Nicotiana tabacum
Nitab4.5_0001007g0050 Nicotiana tabacum
Nitab4.5_0002222g0020 Nicotiana tabacum
Nitab4.5_0006573g0010 Nicotiana tabacum
Nn1g03891 Nelumbo nucifera
Nn1g06762 Nelumbo nucifera
Oeu014709.1 Olea europaea
Oeu021600.1 Olea europaea
Oeu030052.1 Olea europaea
Oeu043421.1 Olea europaea
Oeu051330.1 Olea europaea
Oeu059548.1 Olea europaea
Peaxi162Scf00083g00023 Petunia axillaris
PGR004G0715 Punica granatum
PGSC0003DMG400022406 Solanum tuberosum
Phvul.002G221700 Phaseolus vulgaris
Phvul.006G192300 Phaseolus vulgaris
Potri.004G034200 Populus trichocarpa
Potri.011G042600 Populus trichocarpa
Prupe.4G037000 Prunus persica
Psat1g208760 Pisum sativum
Psat7g109320 Pisum sativum
PSO210G7027 Papaver somniferum
PSO832G0007 Papaver somniferum
QL04p018235 Quercus lobata
RcHm_v2.0_Chr5g0006301 Rosa chinensis
Rhsim02G0119500 Rhododendron simsii
Sabra04G0019900 Salix brachista
Sabra11G0029300 Salix brachista
SalBow8G4438 Salvia bowleyana
Sc24g0000710 Simmondsia chinensis
Sed0006081 Sechium edule
Sed0019218 Sechium edule
SGA_v2.0_scaffold7G03946 Striga asiatica
Solyc02g079160.2 Solanum lycopersicum
Sopen02g023960 Solanum pennellii
Sp7g19620 Schrenkiella parvula
TAR624G1400 Trochodendron aralioides
TAR629G2100 Trochodendron aralioides
THA.LOC104812719 Tarenaya hassleriana
Thecc.06G199700 Theobroma cacao
Thhalv10026096m.g Eutrema salsugineum
TPR.G25690 Trifolium pratense
TPR.G36802 Trifolium pratense
TWI63G1620 Tripterygium wilfordii
unitig_37.g12336 Utricularia gibba
VMungo0251G3177 Vigna mungo
VMungo0540G0810 Vigna mungo

User provided reference genes

Program Settings