Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p03520 Brassica napus
Aa31LG10G4220 Aethionema arabicum
Actinidia34372 Actinidia chinensis
Ah.14g085520 Amaranthus hybridus
AL1G57410 Arabidopsis lyrata
Aqoxy6G02732 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea
AT1G49870 Arabidopsis thaliana
ATR0030G005 Amborella trichopoda
Atru.BG.62.p Acer truncatum
Atru.chr5.2411 Acer truncatum
AUR62027350 Chenopodium quinoa
AUR62031332 Chenopodium quinoa
BcaB04g17289 Brassica carinata
BcaC05g27423 Brassica carinata
BolC8t47171H Brassica oleracea
BraA08t32385Z Brassica rapa
C08p03680 Brassica napus
CAN.G606.42 Capsicum annuum
CARHR039920 Cardamine hirsuta
Carub.0001s3908 Capsella rubella
Ca_11047_v3 Cicer arietinum L.
CBR_g49330 Chara braunii
Cc02_g30880 Coffea canephora
CDE04G1272 Ceratophyllum demersum
Cfa004657 Carpinus fangiana
Ciclev10027845m.g Citrus clementina
CiPaw.05G015400 Carya illinoinensis
ClCG10G010570 Citrullus lanatus
COL.COLO4_32543 Corchorus olitorius
Cpa.g.sc106.79 Carica papaya
CsaV3_4G000490 Cucumis sativus L.
CSS0020952 Camellia sinensis var. sinensis
CSS0029586 Camellia sinensis var. sinensis
DCAR_021965 Daucus carota
Dinv15788 Davidia involucrata
Dinv42219 Davidia involucrata
Duzib052G0964 Durio zibethinus
Duzib132G1015 Durio zibethinus
ECA234G0568 Erigeron canadensis
EL10Ac6g13964 Beta vulgaris
EL10Ac8g19363 Beta vulgaris
Eucgr.I01079 Eucalyptus grandis
FAN15G2146 Fragaria x ananassa
FAN20G1292 Fragaria x ananassa
FAN27G2785 Fragaria x ananassa
FvH4_2g03900 Fragaria vesca
Glyma.10G258901 Glycine max
Glyma.20G132200 Glycine max
Gohir.A12G020400 Gossypium hirsutum
Gohir.D12G020600 Gossypium hirsutum
Gorai.008G021000 Gossypium raimondii
GSVIVG01037865001 Vitis vinifera
HanXRQChr16g0514441 Helianthus annuus
Haze_10252 Corylus avellana
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla
HPP92_017760 Vanilla planifolia
Lalb_Chr02g0145111 Lupinus albus
Lj5A217G88 Lonicera japonica
Lj5g0022753 Lotus japonicus
Lsat_1_v5_gn_5_114361 Lactuca sativa
Manes.10G058310 Manihot esculenta
MD05G1096200 Malus domestica
MD10G1102400 Malus domestica
MD10G1102500 Malus domestica
Medtr1g106795 Medicago truncatula
MELO3C017986.2 Cucumis melo
Migut.B00421 Erythranthe guttata
MSTRG.16692 Avicennia marina
Nitab4.5_0001105g0200 Nicotiana tabacum
Nitab4.5_0004685g0050 Nicotiana tabacum
Oeu021369.1 Olea europaea
Oeu039499.1 Olea europaea
Os03g0604600 Oryza sativa ssp. japonica
Peaxi162Scf00016g02732 Petunia axillaris
PGSC0003DMG400025848 Solanum tuberosum
Phvul.007G043300 Phaseolus vulgaris
Potri.001G296700 Populus trichocarpa
Potri.009G090900 Populus trichocarpa
Pp3c18_18840 Physcomitrium patens
Prupe.8G140600 Prunus persica
Psat6g216240 Pisum sativum
PSO541G1903 Papaver somniferum
PSO675G3182 Papaver somniferum
QL11p031947 Quercus lobata
RcHm_v2.0_Chr4g0421911 Rosa chinensis
RcHm_v2.0_Chr4g0423461 Rosa chinensis
RcHm_v2.0_Chr6g0252931 Rosa chinensis
RcHm_v2.0_Chr6g0252961 Rosa chinensis
Rhsim11G0154700 Rhododendron simsii
RhsimUnG0125900 Rhododendron simsii
Sabra09G0070200 Salix brachista
Sabra16G0185800 Salix brachista
SalBow6G0734 Salvia bowleyana
Sc14g0002570 Simmondsia chinensis
Sed0008985 Sechium edule
SEGI_11188 Sequoiadendron giganteum
SEGI_25924 Sequoiadendron giganteum
SEGI_37018 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43011 Striga asiatica
SGA_v2.0_scaffold225G43014 Striga asiatica
SGA_v2.0_scaffold4001G54416 Striga asiatica
SHI05065 Sapria himalayana
SHI05066 Sapria himalayana
SMO196G0099 Selaginella moellendorffii
Solyc01g107260.4 Solanum lycopersicum
Sopen01g049510 Solanum pennellii
Sp1g36750 Schrenkiella parvula
TAR376G0872 Trochodendron aralioides
TAR628G0206 Trochodendron aralioides
TAR628G0609 Trochodendron aralioides
THA.LOC104825834 Tarenaya hassleriana
Thecc.02G113600 Theobroma cacao
Thhalv10011233m.g Eutrema salsugineum
TPR.G27130 Trifolium pratense
TWI14G1262 Tripterygium wilfordii
unitig_744.g24217 Utricularia gibba
vmacro01976 Vaccinium macrocarpon
VMungo0720G0067 Vigna mungo
Zm00001eb050130 Zea mays

User provided reference genes

Program Settings