Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p34050 Brassica napus
Actinidia05816 Actinidia chinensis
Actinidia31748 Actinidia chinensis
AL2G19670 Arabidopsis lyrata
Aqoxy5G03392 Aquilegia oxysepala
Aqoxy6G02884 Aquilegia oxysepala
Aqoxy7G00962 Aquilegia oxysepala
Aqoxy7G00965 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea
AT1G65032 Arabidopsis thaliana
ATR0829G122 Amborella trichopoda
Atru.chr3.3240 Acer truncatum
AUR62007820 Chenopodium quinoa
BcaB03g15190 Brassica carinata
BcaC08g46243 Brassica carinata
BcaNung05073 Brassica carinata
BolC6t39165H Brassica oleracea
BolC6t39243H Brassica oleracea
BraA07t31031Z Brassica rapa
C06p41870 Brassica napus
C06p42740 Brassica napus
C06p42790 Brassica napus
CAN.G700.29 Capsicum annuum
Carub.0002s1025 Capsella rubella
Ca_18942_v3 Cicer arietinum L.
Cc02_g26330 Coffea canephora
Cfa003675 Carpinus fangiana
Ciclev10023972m.g Citrus clementina
CiPaw.03G039600 Carya illinoinensis
ClCG06G008130 Citrullus lanatus
COL.COLO4_15215 Corchorus olitorius
COL.COLO4_37808 Corchorus olitorius
Cpa.g.sc53.139 Carica papaya
CsaV3_2G011040 Cucumis sativus L.
CSS0008051 Camellia sinensis var. sinensis
CSS0025225 Camellia sinensis var. sinensis
CSS0043287 Camellia sinensis var. sinensis
DCAR_024347 Daucus carota
Duzib128G0861 Durio zibethinus
ECA234G1029 Erigeron canadensis
ECA234G3546 Erigeron canadensis
EL10Ac6g14607 Beta vulgaris
Eucgr.E04248 Eucalyptus grandis
FAN03G3069 Fragaria x ananassa
FAN06G1803 Fragaria x ananassa
FAN10G2338 Fragaria x ananassa
FvH4_7g07070 Fragaria vesca
Glyma.06G291500 Glycine max
Glyma.12G115400 Glycine max
Gohir.A12G270700 Gossypium hirsutum
Gohir.D12G271100 Gossypium hirsutum
Gorai.008G291500 Gossypium raimondii
GSVIVG01001179001 Vitis vinifera
HanXRQChr15g0495711 Helianthus annuus
HanXRQChr16g0522681 Helianthus annuus
HanXRQChr17g0567251 Helianthus annuus
Haze_15813 Corylus avellana
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla
HPP92_026480 Vanilla planifolia
Lalb_Chr25g0285311 Lupinus albus
Lj1g0022259 Lotus japonicus
Lsat_1_v5_gn_4_40501 Lactuca sativa
Manes.06G016700 Manihot esculenta
Manes.06G016750 Manihot esculenta
Mapoly0009s0212 Marchantia polymorpha
MBI04_g32195_MAGBIO Magnolia biondii
MBI04_g32196_MAGBIO Magnolia biondii
MBI16_g31701_MAGBIO Magnolia biondii
MD02G1240300 Malus domestica
MD07G1076600 Malus domestica
Medtr4g078485 Medicago truncatula
MELO3C020371.2 Cucumis melo
Migut.J00830 Erythranthe guttata
Nitab4.5_0004594g0090 Nicotiana tabacum
Nitab4.5_0004800g0020 Nicotiana tabacum
Os02g0695700 Oryza sativa ssp. japonica
Os04g0624900 Oryza sativa ssp. japonica
PGR042G2475 Punica granatum
PGSC0003DMG400001789 Solanum tuberosum
Phvul.010G094300 Phaseolus vulgaris
Phvul.011G119800 Phaseolus vulgaris
Potri.005G094100 Populus trichocarpa
Pp3c3_2840 Physcomitrium patens
Prupe.2G097300 Prunus persica
Psat0s466g0120 Pisum sativum
Psat7g168960 Pisum sativum
PSO017G6472 Papaver somniferum
PSO017G6604 Papaver somniferum
PSO017G7014 Papaver somniferum
QL03p061357 Quercus lobata
QL05p054895 Quercus lobata
QL05p056259 Quercus lobata
QL05p056339 Quercus lobata
RcHm_v2.0_Chr1g0337021 Rosa chinensis
Rhsim07G0044200 Rhododendron simsii
Rhsim07G0044700 Rhododendron simsii
Rhsim07G0124700 Rhododendron simsii
Rhsim13G0110700 Rhododendron simsii
Sabra05G0077900 Salix brachista
SalBow6G6803 Salvia bowleyana
Sc21g0001600 Simmondsia chinensis
Sed0027346 Sechium edule
SEGI_06535 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32938 Striga asiatica
SGA_v2.0_scaffold195G40833 Striga asiatica
SHI34920 Sapria himalayana
Solyc01g081120.2 Solanum lycopersicum
Sopen01g032730 Solanum pennellii
Sp5g22520 Schrenkiella parvula
THA.LOC104823802 Tarenaya hassleriana
Thecc.07G155600 Theobroma cacao
Thhalv10019379m.g Eutrema salsugineum
Thhalv10019610m.g Eutrema salsugineum
TPR.G19239 Trifolium pratense
TPR.G24136 Trifolium pratense
TWI59G0878 Tripterygium wilfordii
unitig_27.g24761 Utricularia gibba
vmacro13578 Vaccinium macrocarpon
Zm00001eb251360 Zea mays
Zm00001eb326860 Zea mays

User provided reference genes

Program Settings