Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11110 Brassica napus
Aa31LG6G1840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis
Actinidia14740 Actinidia chinensis
Actinidia18163 Actinidia chinensis
Ah.12g056010 Amaranthus hybridus
AL7G34940 Arabidopsis lyrata
Aqoxy7G00886 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea
AT4G19150 Arabidopsis thaliana
ATR0829G038 Amborella trichopoda
AUR62007413 Chenopodium quinoa
AUR62027319 Chenopodium quinoa
BcaC09g51436 Brassica carinata
BcaNung04008 Brassica carinata
BolC1t01287H Brassica oleracea
BolC3t20450H Brassica oleracea
BraA01t01057Z Brassica rapa
C01p13140 Brassica napus
C03p81780 Brassica napus
CAN.G320.16 Capsicum annuum
CANSAT21G0913 Cannabis sativa
CARHR226020 Cardamine hirsuta
Carub.0007s2200 Capsella rubella
Ca_25099_v3 Cicer arietinum L.
CBR_g41202 Chara braunii
Cc08_g05010 Coffea canephora
CDE11G0189 Ceratophyllum demersum
Cfa012603 Carpinus fangiana
Ciclev10005760m.g Citrus clementina
CiPaw.12G072000 Carya illinoinensis
COL.COLO4_12070 Corchorus olitorius
Cpa.g.sc137.18 Carica papaya
CsaV3_3G040920 Cucumis sativus L.
CSS0010448 Camellia sinensis var. sinensis
DCAR_028235 Daucus carota
Dinv28010 Davidia involucrata
Dinv28011 Davidia involucrata
Duzib187G1769 Durio zibethinus
ECA233G2922 Erigeron canadensis
EL10Ac5g11923 Beta vulgaris
Eucgr.D02591 Eucalyptus grandis
FAN04G1597 Fragaria x ananassa
FAN08G1612 Fragaria x ananassa
FAN13G3229 Fragaria x ananassa
FAN18G1960 Fragaria x ananassa
FAN18G4370 Fragaria x ananassa
FvH4_5g24000 Fragaria vesca
Glyma.01G149900 Glycine max
Glyma.09G214000 Glycine max
Gohir.A05G381700 Gossypium hirsutum
Gohir.D03G018700 Gossypium hirsutum
Gohir.D04G033600 Gossypium hirsutum
Gohir.D08G138080 Gossypium hirsutum
Gorai.004G141500 Gossypium raimondii
Gorai.012G037900 Gossypium raimondii
GSVIVG01022797001 Vitis vinifera
HanXRQChr08g0226771 Helianthus annuus
Haze_08048 Corylus avellana
Haze_08058 Corylus avellana
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla
HPP92_021118 Vanilla planifolia
Hund11101 Selenicereus undatus
Lalb_Chr05g0215421 Lupinus albus
Lj2g0004034 Lotus japonicus
Lj8A334T74 Lonicera japonica
Lsat_1_v5_gn_6_15221 Lactuca sativa
Manes.17G003100 Manihot esculenta
Mapoly0051s0035 Marchantia polymorpha
Medtr5g026800 Medicago truncatula
Migut.E01351 Erythranthe guttata
MSTRG.1769 Avicennia marina
Nitab4.5_0000018g0190 Nicotiana tabacum
Nitab4.5_0000532g0060 Nicotiana tabacum
Nitab4.5_0001175g0040 Nicotiana tabacum
Nitab4.5_0001175g0100 Nicotiana tabacum
Nitab4.5_0001175g0110 Nicotiana tabacum
Nitab4.5_0006541g0010 Nicotiana tabacum
Nn3g19252 Nelumbo nucifera
Oeu042209.2 Olea europaea
Os10g0580700 Oryza sativa ssp. japonica
Peaxi162Scf00045g00636 Petunia axillaris
PGR031G1524 Punica granatum
PGSC0003DMG400018460 Solanum tuberosum
Phvul.002G128300 Phaseolus vulgaris
Potri.001G130500 Populus trichocarpa
Potri.003G103400 Populus trichocarpa
Pp3c7_14210 Physcomitrium patens
Prupe.5G019900 Prunus persica
Psat2g142320 Pisum sativum
PSO675G8107 Papaver somniferum
PSO717G0136 Papaver somniferum
QL08p050705 Quercus lobata
QL08p050707 Quercus lobata
RcHm_v2.0_Chr7g0213461 Rosa chinensis
Rhsim07G0139200 Rhododendron simsii
Sabra01G0100900 Salix brachista
Sabra03G0070600 Salix brachista
SalBow8G0939 Salvia bowleyana
Sc07g0008230 Simmondsia chinensis
Sed0010053 Sechium edule
SEGI_07236 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35881 Striga asiatica
SMO329G0074 Selaginella moellendorffii
Solyc08g005520.3 Solanum lycopersicum
Sopen08g001530 Solanum pennellii
Sp7g17850 Schrenkiella parvula
TAR375G0514 Trochodendron aralioides
THA.LOC104812889 Tarenaya hassleriana
Thecc.01G139200 Theobroma cacao
Thhalv10026017m.g Eutrema salsugineum
TPR.G17268 Trifolium pratense
TWI23G0232 Tripterygium wilfordii
unitig_0.g2207 Utricularia gibba
vmacro17427 Vaccinium macrocarpon
VMungo1215G2540 Vigna mungo
Zm00001eb025510 Zea mays

User provided reference genes

Program Settings