Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16970 Brassica napus
A08p11670 Brassica napus
Aa31LG9G2250 Aethionema arabicum
Actinidia12507 Actinidia chinensis
Actinidia32074 Actinidia chinensis
AL7G40560 Arabidopsis lyrata
Aqoxy5G02466 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea
AT4G15140 Arabidopsis thaliana
ATR0763G071 Amborella trichopoda
Atru.chr8.1011 Acer truncatum
AUR62017858 Chenopodium quinoa
BcaB02g07838 Brassica carinata
BcaB04g18284 Brassica carinata
BcaC07g37876 Brassica carinata
BcaC08g44251 Brassica carinata
BolC6t36859H Brassica oleracea
BolC8t48269H Brassica oleracea
BraA05t20604Z Brassica rapa
BraA08t33161Z Brassica rapa
C06p16570 Brassica napus
CAN.G529.20 Capsicum annuum
CANSAT64G1482 Cannabis sativa
CARHR221880 Cardamine hirsuta
Carub.0007s2685 Capsella rubella
Ca_16320_v3 Cicer arietinum L.
Cc00_g04870 Coffea canephora
CDE05G3197 Ceratophyllum demersum
CDE11G0296 Ceratophyllum demersum
Cfa023365 Carpinus fangiana
Ciclev10012907m.g Citrus clementina
CiPaw.03G109100 Carya illinoinensis
CiPaw.04G072200 Carya illinoinensis
ClCG11G016910 Citrullus lanatus
COL.COLO4_18222 Corchorus olitorius
COL.COLO4_19989 Corchorus olitorius
Cpa.g.sc32.52 Carica papaya
Cpa.g.sc8.265 Carica papaya
CsaV3_4G032520 Cucumis sativus L.
CSS0026100 Camellia sinensis var. sinensis
CSS0046570 Camellia sinensis var. sinensis
DCAR_029496 Daucus carota
Dinv40839 Davidia involucrata
Duzib138G0874 Durio zibethinus
ECA247G3587 Erigeron canadensis
EL10Ac6g15336 Beta vulgaris
Eucgr.A00949 Eucalyptus grandis
FAN02G3828 Fragaria x ananassa
FAN05G1961 Fragaria x ananassa
FAN09G0937 Fragaria x ananassa
FAN14G2613 Fragaria x ananassa
FvH4_6g39300 Fragaria vesca
Glyma.13G004200 Glycine max
Glyma.20G063000 Glycine max
Gohir.A11G155300 Gossypium hirsutum
Gohir.D11G162300 Gossypium hirsutum
Gorai.007G172600 Gossypium raimondii
GSVIVG01015888001 Vitis vinifera
HanXRQChr02g0035171 Helianthus annuus
Haze_13544 Corylus avellana
Haze_13545 Corylus avellana
HPP92_016064 Vanilla planifolia
Hund04387 Selenicereus undatus
Hund23023 Selenicereus undatus
Lalb_Chr17g0337141 Lupinus albus
Lj6g0005292 Lotus japonicus
Lsat_1_v5_gn_1_29560 Lactuca sativa
Manes.08G068100 Manihot esculenta
MD09G1143500 Malus domestica
MD17G1129800 Malus domestica
Medtr3g082070 Medicago truncatula
MELO3C026363.2 Cucumis melo
Migut.H01260 Erythranthe guttata
Nitab4.5_0000019g0110 Nicotiana tabacum
Nitab4.5_0000170g0320 Nicotiana tabacum
Nitab4.5_0002292g0030 Nicotiana tabacum
Nitab4.5_0011512g0010 Nicotiana tabacum
Nn7g38339 Nelumbo nucifera
Oeu027256.1 Olea europaea
Oeu036758.1 Olea europaea
Os04g0504200 Oryza sativa ssp. japonica
Os10g0459550 Oryza sativa ssp. japonica
Peaxi162Scf00322g00416 Petunia axillaris
Peaxi162Scf00393g01011 Petunia axillaris
PGR031G0759 Punica granatum
PGSC0003DMG400013558 Solanum tuberosum
Phvul.007G120134 Phaseolus vulgaris
Potri.006G008000 Populus trichocarpa
Prupe.3G184300 Prunus persica
Psat5g106240 Pisum sativum
PSO675G8005 Papaver somniferum
QL04p064817 Quercus lobata
QL04p064939 Quercus lobata
QL07p025679 Quercus lobata
QL07p026949 Quercus lobata
QL07p026979 Quercus lobata
QL07p027003 Quercus lobata
QL09p045725 Quercus lobata
QL10p019398 Quercus lobata
RcHm_v2.0_Chr2g0153221 Rosa chinensis
RcHm_v2.0_Chr3g0480451 Rosa chinensis
Rhsim12G0015400 Rhododendron simsii
Sabra06G0006200 Salix brachista
Sabra16G0000300 Salix brachista
Sc07g0001930 Simmondsia chinensis
Sed0014549 Sechium edule
Sed0027280 Sechium edule
SGA_v2.0_scaffold49G18372 Striga asiatica
Solyc07g043070.3 Solanum lycopersicum
Sopen07g022630 Solanum pennellii
Sp7g13370 Schrenkiella parvula
TAR626G1015 Trochodendron aralioides
TAR626G1390 Trochodendron aralioides
THA.LOC104808506 Tarenaya hassleriana
Thecc.01G174700 Theobroma cacao
Thhalv10027487m.g Eutrema salsugineum
TPR.G17559 Trifolium pratense
TWI34G1686 Tripterygium wilfordii
unitig_62.g23243 Utricularia gibba
vmacro08765 Vaccinium macrocarpon
VMungo0540G0033 Vigna mungo
Zm00001eb078060 Zea mays

User provided reference genes

Program Settings