Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p09080 Brassica napus
Aa31LG3G7830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis
Actinidia23826 Actinidia chinensis
Actinidia34511 Actinidia chinensis
Ah.09g233500 Amaranthus hybridus
AL8G25600 Arabidopsis lyrata
Aqoxy2G00669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea
AT5G51340 Arabidopsis thaliana
ATR1127G223 Amborella trichopoda
Atru.chr10.2355 Acer truncatum
Atru.chr10.2357 Acer truncatum
Atru.chr10.2358 Acer truncatum
AUR62039472 Chenopodium quinoa
AUR62041830 Chenopodium quinoa
BcaB08g35491 Brassica carinata
BcaC04g20686 Brassica carinata
BolC9t56942H Brassica oleracea
BraA10t42993Z Brassica rapa
C09p40600 Brassica napus
CANSAT54G2825 Cannabis sativa
CARHR264090 Cardamine hirsuta
Carub.0008s1136 Capsella rubella
Ca_05732_v3 Cicer arietinum L.
CBR_g46787 Chara braunii
Cc01_g15520 Coffea canephora
Cc01_g15530 Coffea canephora
CDE07G0456 Ceratophyllum demersum
Cfa011860 Carpinus fangiana
Ciclev10000965m.g Citrus clementina
Ciclev10004061m.g Citrus clementina
CiPaw.13G059900 Carya illinoinensis
ClCG10G000010 Citrullus lanatus
ClCG10G000020 Citrullus lanatus
COL.COLO4_08158 Corchorus olitorius
Cpa.g.sc2.260 Carica papaya
Cpa.g.sc2.261 Carica papaya
Cre12.g532650 Chlamydomonas reinhardtii
CsaV3_3G000010 Cucumis sativus L.
CSS0014639 Camellia sinensis var. sinensis
DCAR_012719 Daucus carota
Dinv28760 Davidia involucrata
Duzib168G0790 Durio zibethinus
ECA248G1121 Erigeron canadensis
EL10Ac8g20566 Beta vulgaris
Eucgr.J01848 Eucalyptus grandis
FAN11G3159 Fragaria x ananassa
FAN16G1417 Fragaria x ananassa
FAN21G1719 Fragaria x ananassa
FAN25G3237 Fragaria x ananassa
FvH4_3g41130 Fragaria vesca
Glyma.02G238400 Glycine max
Glyma.14G207300 Glycine max
Gohir.A03G022700 Gossypium hirsutum
Gohir.D03G146000 Gossypium hirsutum
Gorai.003G153200 Gossypium raimondii
GSVIVG01024525001 Vitis vinifera
HanXRQChr11g0338241 Helianthus annuus
Haze_24495 Corylus avellana
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla
HPP92_024257 Vanilla planifolia
HPP92_024263 Vanilla planifolia
Lalb_Chr10g0103951 Lupinus albus
Lj2C1106G3 Lonicera japonica
LjContig00141g0008115 Lotus japonicus
Lsat_1_v5_gn_5_131141 Lactuca sativa
Lsat_1_v5_gn_5_176920 Lactuca sativa
Manes.18G123800 Manihot esculenta
Mapoly0020s0144 Marchantia polymorpha
MCO15G146 Micromonas commoda
MD03G1047100 Malus domestica
Medtr4g023640 Medicago truncatula
Medtr5g075970 Medicago truncatula
Medtr5g078560 Medicago truncatula
Medtr6g049450 Medicago truncatula
Medtr6g051400 Medicago truncatula
MELO3C013696.2 Cucumis melo
Migut.N00711 Erythranthe guttata
Nitab4.5_0000195g0150 Nicotiana tabacum
Nitab4.5_0001025g0010 Nicotiana tabacum
Nitab4.5_0002030g0020 Nicotiana tabacum
Nn5g26767 Nelumbo nucifera
Nn5g26768 Nelumbo nucifera
Oeu034746.1 Olea europaea
Os04g0347600 Oryza sativa ssp. japonica
Peaxi162Scf00293g00815 Petunia axillaris
Peaxi162Scf00293g00816 Petunia axillaris
PGR119G0508 Punica granatum
Phvul.008G243600 Phaseolus vulgaris
Potri.019G133000 Populus trichocarpa
Pp3c10_12710 Physcomitrium patens
Pp3c26_4960 Physcomitrium patens
Pp3c3_15250 Physcomitrium patens
Prupe.6G038300 Prunus persica
Psat2g049480 Pisum sativum
PSO339G5368 Papaver somniferum
PSO384G2469 Papaver somniferum
QL01p023614 Quercus lobata
RcHm_v2.0_Chr5g0073921 Rosa chinensis
Rhsim01G0245200 Rhododendron simsii
Sabra19G0129200 Salix brachista
Sc11g0008920 Simmondsia chinensis
Sed0004215 Sechium edule
SEGI_25118 Sequoiadendron giganteum
SEGI_41332 Sequoiadendron giganteum
SGA_v2.0_scaffold120G33005 Striga asiatica
SMO119G0519 Selaginella moellendorffii
Solyc09g055340.4 Solanum lycopersicum
Sopen09g017740 Solanum pennellii
Sp6g13540 Schrenkiella parvula
TAR369G0765 Trochodendron aralioides
THA.LOC104798389 Tarenaya hassleriana
THA.LOC104824615 Tarenaya hassleriana
THA.LOC104824654 Tarenaya hassleriana
Thecc.09G366100 Theobroma cacao
Thhalv10012792m.g Eutrema salsugineum
TPR.G15403 Trifolium pratense
TWI31G0750 Tripterygium wilfordii
vmacro14657 Vaccinium macrocarpon
VMungo0647G2416 Vigna mungo
Zm00001eb193950 Zea mays

User provided reference genes

Program Settings