Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03780 Brassica napus
Aa31LG3G18230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis
Actinidia04343 Actinidia chinensis
AL6G18780 Arabidopsis lyrata
AL6G34590 Arabidopsis lyrata
Aqoxy2G00030 Aquilegia oxysepala
Aqoxy2G01235 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea
AT5G08340 Arabidopsis thaliana
AT5G23330 Arabidopsis thaliana
ATR0665G473 Amborella trichopoda
Atru.chr11.1240 Acer truncatum
AUR62017731 Chenopodium quinoa
AUR62032950 Chenopodium quinoa
BcaB01g05607 Brassica carinata
BcaB01g05611 Brassica carinata
BolC3t12958H Brassica oleracea
BolC9t53696H Brassica oleracea
BraA03t09725Z Brassica rapa
C03p04260 Brassica napus
CAN.G274.15 Capsicum annuum
CANSAT78G1799 Cannabis sativa
CARHR190210 Cardamine hirsuta
CARHR204730 Cardamine hirsuta
Carub.0006s0724 Capsella rubella
Carub.0006s2110 Capsella rubella
Carub.0006s2111 Capsella rubella
Cc00_g09970 Coffea canephora
CDE02G4670 Ceratophyllum demersum
Cfa008776 Carpinus fangiana
Ciclev10031833m.g Citrus clementina
CiPaw.05G172000 Carya illinoinensis
ClCG02G014150 Citrullus lanatus
COL.COLO4_33107 Corchorus olitorius
Cpa.g.sc60.91 Carica papaya
Cre13.g607600 Chlamydomonas reinhardtii
CsaV3_5G029010 Cucumis sativus L.
CSS0032634 Camellia sinensis var. sinensis
CSS0035224 Camellia sinensis var. sinensis
Duzib132G0448 Durio zibethinus
ECA240G3241 Erigeron canadensis
EL10Ac9g22981 Beta vulgaris
Eucgr.G02586 Eucalyptus grandis
FAN12G2193 Fragaria x ananassa
FAN17G0671 Fragaria x ananassa
FvH4_4g37140 Fragaria vesca
Glyma.10G286400 Glycine max
Glyma.20G102800 Glycine max
Gohir.A04G109424 Gossypium hirsutum
Gohir.D04G148900 Gossypium hirsutum
Gorai.012G135400 Gossypium raimondii
GSVIVG01034416001 Vitis vinifera
HanXRQChr03g0076951 Helianthus annuus
Haze_11788 Corylus avellana
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla
HPP92_017784 Vanilla planifolia
Lalb_Chr06g0163931 Lupinus albus
Lj3A846G60 Lonicera japonica
Lj5g0013377 Lotus japonicus
Lsat_1_v5_gn_0_15460 Lactuca sativa
Manes.04G162800 Manihot esculenta
Mapoly0019s0104 Marchantia polymorpha
MBI06_g44273_MAGBIO Magnolia biondii
MCO07G267 Micromonas commoda
MD13G1003200 Malus domestica
MD16G1004200 Malus domestica
Medtr1g114560 Medicago truncatula
MELO3C011756.2 Cucumis melo
Migut.L00869 Erythranthe guttata
MSTRG.428 Avicennia marina
MSTRG.8091 Avicennia marina
Nitab4.5_0004979g0070 Nicotiana tabacum
Nitab4.5_0005997g0050 Nicotiana tabacum
Nn2g12513 Nelumbo nucifera
Nn8g40194 Nelumbo nucifera
Oeu006329.1 Olea europaea
Os03g0801700 Oryza sativa ssp. japonica
Os06g0536800 Oryza sativa ssp. japonica
Peaxi162Scf00681g00221 Petunia axillaris
PGR142G1667 Punica granatum
PGSC0003DMG400011512 Solanum tuberosum
Phvul.007G014500 Phaseolus vulgaris
Potri.007G075500 Populus trichocarpa
Pp3c14_5150 Physcomitrium patens
Pp3c5_28930 Physcomitrium patens
Prupe.1G349200 Prunus persica
Psat6g234000 Pisum sativum
PSO170G1614 Papaver somniferum
PSO782G0560 Papaver somniferum
QL08p056966 Quercus lobata
QL08p056974 Quercus lobata
RcHm_v2.0_Chr4g0446941 Rosa chinensis
Rhsim12G0193800 Rhododendron simsii
Sabra07G0063800 Salix brachista
SalBow2G1748 Salvia bowleyana
Sc06g0004050 Simmondsia chinensis
Sc10g0006980 Simmondsia chinensis
Sed0003381 Sechium edule
SEGI_34336 Sequoiadendron giganteum
SEGI_40912 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00551 Striga asiatica
SGA_v2.0_scaffold42G16129 Striga asiatica
SGA_v2.0_scaffold580G53041 Striga asiatica
SGA_v2.0_scaffold92G28263 Striga asiatica
SMO141G0020 Selaginella moellendorffii
Solyc04g008990.3 Solanum lycopersicum
Sopen04g004170 Solanum pennellii
Sp6g34600 Schrenkiella parvula
TAR628G0373 Trochodendron aralioides
THA.LOC104800739 Tarenaya hassleriana
THA.LOC104818378 Tarenaya hassleriana
Thecc.02G154800 Theobroma cacao
Thhalv10013886m.g Eutrema salsugineum
TPR.G4059 Trifolium pratense
TWI74G1585 Tripterygium wilfordii
TWI77G0721 Tripterygium wilfordii
unitig_749.g13340 Utricularia gibba
vmacro16923 Vaccinium macrocarpon
VMungo0720G2382 Vigna mungo
Zm00001eb061200 Zea mays

User provided reference genes

Program Settings