Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02720 Brassica napus
Aa31LG6G12960 Aethionema arabicum
Actinidia17434 Actinidia chinensis
Actinidia22967 Actinidia chinensis
Ah.03g148920 Amaranthus hybridus
Aqoxy5G01802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DLPQ3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7P5W6 Arachis hypogaea
AT4G35987 Arabidopsis thaliana
ATR0810G135 Amborella trichopoda
Atru.chr3.815 Acer truncatum
AUR62003357 Chenopodium quinoa
AUR62029479 Chenopodium quinoa
BcaC03g14989 Brassica carinata
BcaC04g20386 Brassica carinata
BcaC04g20390 Brassica carinata
BcaNung00773 Brassica carinata
BolC1t00288H Brassica oleracea
BolC2t08600H Brassica oleracea
BolC9t57293H Brassica oleracea
BraA01t00258Z Brassica rapa
C01p03020 Brassica napus
C02p25250 Brassica napus
C09p44210 Brassica napus
CAN.G1817.1 Capsicum annuum
CANSAT25G3476 Cannabis sativa
CANSAT25G3534 Cannabis sativa
CANSAT54G2084 Cannabis sativa
CARHR244380 Cardamine hirsuta
Carub.0007s0423 Capsella rubella
Ca_22385_v3 Cicer arietinum L.
Cc07_g10870 Coffea canephora
CDE02G4028 Ceratophyllum demersum
CDE02G4243 Ceratophyllum demersum
Cfa006983 Carpinus fangiana
Ciclev10026134m.g Citrus clementina
CiPaw.07G059900 Carya illinoinensis
COL.COLO4_22441 Corchorus olitorius
Cpa.g.sc6.264 Carica papaya
Cpa.g.sc6.265 Carica papaya
CsaV3_6G047220 Cucumis sativus L.
CSS0000310 Camellia sinensis var. sinensis
CSS0021178 Camellia sinensis var. sinensis
DCAR_021507 Daucus carota
Dinv33650 Davidia involucrata
Duzib147G1015 Durio zibethinus
ECA238G1797 Erigeron canadensis
EL10Ac6g15486 Beta vulgaris
Eucgr.I02338 Eucalyptus grandis
FAN19G1692 Fragaria x ananassa
FAN26G2561 Fragaria x ananassa
FvH4_1g11701 Fragaria vesca
Glyma.02G047300 Glycine max
Gohir.A02G171200 Gossypium hirsutum
Gohir.D03G008900 Gossypium hirsutum
Gorai.003G009100 Gossypium raimondii
GSVIVG01018765001 Vitis vinifera
HanXRQChr04g0119941 Helianthus annuus
Haze_03751 Corylus avellana
Hma1.2p1_0258F.1_g104040 Hydrangea macrophylla
Hma1.2p1_0258F.1_g104050 Hydrangea macrophylla
HPP92_022639 Vanilla planifolia
Hund14051 Selenicereus undatus
Lalb_Chr05g0229831 Lupinus albus
Lj4A220G94 Lonicera japonica
Lj4g0017154 Lotus japonicus
Lsat_1_v5_gn_2_76041 Lactuca sativa
Manes.01G147000 Manihot esculenta
Manes.02G105600 Manihot esculenta
Mapoly0087s0053 Marchantia polymorpha
MBI05_g33508_MAGBIO Magnolia biondii
MCO11G032 Micromonas commoda
MD02G1130100 Malus domestica
MD15G1244100 Malus domestica
Medtr8g075480 Medicago truncatula
MELO3C007914.2 Cucumis melo
Migut.L00672 Erythranthe guttata
Migut.L00699 Erythranthe guttata
MSTRG.3610 Avicennia marina
Nitab4.5_0000438g0160 Nicotiana tabacum
Nitab4.5_0000438g0170 Nicotiana tabacum
Nitab4.5_0000864g0140 Nicotiana tabacum
Nitab4.5_0003548g0050 Nicotiana tabacum
Nitab4.5_0008011g0040 Nicotiana tabacum
Nn6g32040 Nelumbo nucifera
Oeu005141.2 Olea europaea
Os03g0243800 Oryza sativa ssp. japonica
Peaxi162Scf00328g00828 Petunia axillaris
PGR102G1692 Punica granatum
PGSC0003DMG402022530 Solanum tuberosum
Phvul.003G263600 Phaseolus vulgaris
Potri.007G057000 Populus trichocarpa
Pp3c16_25190 Physcomitrium patens
Prupe.7G169600 Prunus persica
Psat4g100640 Pisum sativum
PSO170G4882 Papaver somniferum
PSO700G0153 Papaver somniferum
QL06p050655 Quercus lobata
QL06p050760 Quercus lobata
QL11p035074 Quercus lobata
RcHm_v2.0_Chr2g0099281 Rosa chinensis
Sabra05G0092400 Salix brachista
Sabra07G0048900 Salix brachista
Sabra07G0049000 Salix brachista
SalBow5G1778 Salvia bowleyana
Sc07g0001050 Simmondsia chinensis
Sed0020941 Sechium edule
SEGI_12964 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17085 Striga asiatica
SMO361G0665 Selaginella moellendorffii
Solyc03g033470.3 Solanum lycopersicum
Sopen03g006220 Solanum pennellii
Sp7g33770 Schrenkiella parvula
TAR376G0066 Trochodendron aralioides
TAR376G1090 Trochodendron aralioides
THA.LOC104807502 Tarenaya hassleriana
Thecc.01G016800 Theobroma cacao
Thhalv10025786m.g Eutrema salsugineum
TPR.G24083 Trifolium pratense
TWI73G0981 Tripterygium wilfordii
unitig_46.g18721 Utricularia gibba
VMungo0251G1912 Vigna mungo
Zm00001eb398850 Zea mays

User provided reference genes

Program Settings