Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20520 Brassica napus
Aa31LG5G22520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1327 Anthoceros agrestis
Actinidia19675 Actinidia chinensis
Actinidia40026 Actinidia chinensis
Ah.15g092380 Amaranthus hybridus
AL4G33560 Arabidopsis lyrata
Aqoxy1G01232 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LA4XPU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q46SAL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea
AT2G37195 Arabidopsis thaliana
ATR0048G054 Amborella trichopoda
Atru.chr8.1867 Acer truncatum
AUR62028561 Chenopodium quinoa
AUR62033514 Chenopodium quinoa
BcaC01g06644 Brassica carinata
BcaC03g13318 Brassica carinata
BcaC03g13319 Brassica carinata
BcaC08g43911 Brassica carinata
BolC1t01590H Brassica oleracea
BolC3t14804H Brassica oleracea
BraA03t11294Z Brassica rapa
C02p04540 Brassica napus
C03p24120 Brassica napus
C06p12980 Brassica napus
C07p17010 Brassica napus
CAN.G888.2 Capsicum annuum
CAN.G888.4 Capsicum annuum
CANSAT80G0273 Cannabis sativa
CARHR131710 Cardamine hirsuta
Carub.0004s1909 Capsella rubella
Ca_11474_v3 Cicer arietinum L.
Cc06_g03930 Coffea canephora
Cfa017565 Carpinus fangiana
Ciclev10013106m.g Citrus clementina
CiPaw.09G176000 Carya illinoinensis
ClCG10G020300 Citrullus lanatus
COL.COLO4_27023 Corchorus olitorius
Cpa.g.sc102.12 Carica papaya
CsaV3_3G035800 Cucumis sativus L.
CSS0042234 Camellia sinensis var. sinensis
DCAR_009295 Daucus carota
Dinv35529 Davidia involucrata
Dinv35757 Davidia involucrata
Dinv37285 Davidia involucrata
Duzib128G1557 Durio zibethinus
ECA238G0062 Erigeron canadensis
EL10Ac7g16554 Beta vulgaris
Eucgr.K03249 Eucalyptus grandis
FAN02G4276 Fragaria x ananassa
FAN09G2873 Fragaria x ananassa
FAN14G3947 Fragaria x ananassa
FvH4_6g15910 Fragaria vesca
Glyma.10G053300 Glycine max
Glyma.13G140300 Glycine max
Gohir.A04G074100 Gossypium hirsutum
Gohir.A09G149400 Gossypium hirsutum
Gohir.D04G113200 Gossypium hirsutum
Gohir.D09G145300 Gossypium hirsutum
Gorai.006G166500 Gossypium raimondii
Gorai.009G417600 Gossypium raimondii
GSVIVG01025685001 Vitis vinifera
HanXRQChr07g0195271 Helianthus annuus
Haze_20589 Corylus avellana
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla
HPP92_022407 Vanilla planifolia
HPP92_027503 Vanilla planifolia
Hund20246 Selenicereus undatus
Lalb_Chr21g0314871 Lupinus albus
Lj2A112T40 Lonicera japonica
Lj5g0010745 Lotus japonicus
Lsat_1_v5_gn_2_109060 Lactuca sativa
Manes.08G007300 Manihot esculenta
MBI07_g19293_MAGBIO Magnolia biondii
MD04G1097300 Malus domestica
MD12G1118700 Malus domestica
Medtr1g064490 Medicago truncatula
MELO3C009340.2 Cucumis melo
Migut.J00532 Erythranthe guttata
MSTRG.19165 Avicennia marina
Nitab4.5_0000101g0130 Nicotiana tabacum
Nitab4.5_0003923g0010 Nicotiana tabacum
Nn2g10804 Nelumbo nucifera
Nn2g13105 Nelumbo nucifera
Oeu059967.1 Olea europaea
Os02g0805700 Oryza sativa ssp. japonica
Peaxi162Scf00123g00014 Petunia axillaris
PGR142G2369 Punica granatum
PGSC0003DMG400021546 Solanum tuberosum
Phvul.007G220100 Phaseolus vulgaris
Potri.006G127800 Populus trichocarpa
Potri.016G090000 Populus trichocarpa
Prupe.6G236600 Prunus persica
Psat6g070840 Pisum sativum
PSO063G5019 Papaver somniferum
PSO339G1849 Papaver somniferum
QL07p044433 Quercus lobata
RcHm_v2.0_Chr3g0469601 Rosa chinensis
Sabra06G0100500 Salix brachista
Sabra16G0095600 Salix brachista
SalBow8G4982 Salvia bowleyana
Sc02g0001830 Simmondsia chinensis
Sed0007562 Sechium edule
Sed0017827 Sechium edule
SGA_v2.0_scaffold40G15542 Striga asiatica
Solyc09g007800.3 Solanum lycopersicum
Sopen09g002640 Solanum pennellii
Sp4g19510 Schrenkiella parvula
TAR369G0155 Trochodendron aralioides
TAR623G0732 Trochodendron aralioides
THA.LOC104823447 Tarenaya hassleriana
Thecc.05G060700 Theobroma cacao
Thhalv10017389m.g Eutrema salsugineum
TPR.G21203 Trifolium pratense
TWI77G0724 Tripterygium wilfordii
unitig_27.g25371 Utricularia gibba
vmacro20032 Vaccinium macrocarpon
VMungo0720G0455 Vigna mungo
Zm00001eb191980 Zea mays
Zm00001eb258270 Zea mays

User provided reference genes

Program Settings