Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04100 Brassica napus
A10p27930 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis
Actinidia06618 Actinidia chinensis
Ah.02g121490 Amaranthus hybridus
AL6G19700 Arabidopsis lyrata
Aqoxy5G02229 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea
AT5G09310 Arabidopsis thaliana
ATR0138G005 Amborella trichopoda
Atru.chr4.901 Acer truncatum
AUR62003565 Chenopodium quinoa
AUR62017880 Chenopodium quinoa
BcaB08g37219 Brassica carinata
BolC3t12987H Brassica oleracea
BolC9t59563H Brassica oleracea
BraA03t09753Z Brassica rapa
BraA10t44842Z Brassica rapa
C03p04560 Brassica napus
CAN.G934.1 Capsicum annuum
CANSAT01G2296 Cannabis sativa
CARHR204090 Cardamine hirsuta
Carub.0006s0786 Capsella rubella
Ca_16968_v3 Cicer arietinum L.
CBR_g29852 Chara braunii
Cc00_g19040 Coffea canephora
Cc00_g31500 Coffea canephora
Cc07_g18520 Coffea canephora
CDE04G1235 Ceratophyllum demersum
CDE12G0205 Ceratophyllum demersum
Ciclev10002814m.g Citrus clementina
CiPaw.04G082200 Carya illinoinensis
ClCG02G000500 Citrullus lanatus
Cre07.g323050 Chlamydomonas reinhardtii
CsaV3_2G018330 Cucumis sativus L.
CSS0043698 Camellia sinensis var. sinensis
DCAR_014336 Daucus carota
Dinv07122 Davidia involucrata
Dinv24364 Davidia involucrata
Duzib187G1992 Durio zibethinus
ECA247G0944 Erigeron canadensis
EL10Ac6g15303 Beta vulgaris
Eucgr.I00202 Eucalyptus grandis
FAN10G0435 Fragaria x ananassa
FAN10G3948 Fragaria x ananassa
FAN11G3155 Fragaria x ananassa
FAN15G0521 Fragaria x ananassa
FAN24G0187 Fragaria x ananassa
FvH4_2g08820 Fragaria vesca
FvH4_3g04510 Fragaria vesca
Glyma.04G212600 Glycine max
Glyma.06G153700 Glycine max
Gohir.D04G031000 Gossypium hirsutum
GSVIVG01026483001 Vitis vinifera
HanXRQChr15g0491331 Helianthus annuus
Haze_25235 Corylus avellana
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla
HPP92_019397 Vanilla planifolia
Hund04414 Selenicereus undatus
Hund23271 Selenicereus undatus
Lalb_Chr08g0238351 Lupinus albus
Lalb_Chr11g0068471 Lupinus albus
Lalb_Chr11g0068481 Lupinus albus
Lj1g0025116 Lotus japonicus
Lj4A838G19 Lonicera japonica
Lj4A838T21 Lonicera japonica
Lj4A839G53 Lonicera japonica
Lsat_1_v5_gn_9_25981 Lactuca sativa
Manes.03G123050 Manihot esculenta
Mapoly0113s0017 Marchantia polymorpha
MCO14G552 Micromonas commoda
MD02G1262600 Malus domestica
MD07G1057500 Malus domestica
Medtr3g096320 Medicago truncatula
MELO3C023238.2 Cucumis melo
Migut.L00880 Erythranthe guttata
Migut.L00965 Erythranthe guttata
MSTRG.3605 Avicennia marina
Nitab4.5_0000181g0060 Nicotiana tabacum
Nitab4.5_0003581g0060 Nicotiana tabacum
Nn5g28548 Nelumbo nucifera
Oeu004242.1 Olea europaea
Oeu050125.1 Olea europaea
Os01g0960000 Oryza sativa ssp. japonica
Peaxi162Scf00270g01115 Petunia axillaris
PGR119G2011 Punica granatum
PGSC0003DMG400030138 Solanum tuberosum
Phvul.009G150900 Phaseolus vulgaris
Potri.005G063100 Populus trichocarpa
Potri.007G106200 Populus trichocarpa
Pp3c15_3010 Physcomitrium patens
PRCOL_00001485 Prasinoderma coloniale
Prupe.4G271100 Prunus persica
Psat5g062320 Pisum sativum
PSO017G4081 Papaver somniferum
PSO170G5905 Papaver somniferum
QL10p043584 Quercus lobata
RcHm_v2.0_Chr6g0264391 Rosa chinensis
Rhsim10G0133300 Rhododendron simsii
Sabra05G0052300 Salix brachista
SalBow7G2903 Salvia bowleyana
Sc07g0001830 Simmondsia chinensis
Sed0005537 Sechium edule
SEGI_17702 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08773 Striga asiatica
SMO367G0154 Selaginella moellendorffii
Solyc06g016760.3 Solanum lycopersicum
Sopen06g005870 Solanum pennellii
Sp6g34010 Schrenkiella parvula
TAR381G0246 Trochodendron aralioides
TAR625G1289 Trochodendron aralioides
THA.LOC104800074 Tarenaya hassleriana
Thecc.01G132600 Theobroma cacao
Thhalv10014951m.g Eutrema salsugineum
TPR.G28231 Trifolium pratense
TWI75G0808 Tripterygium wilfordii
TWI79G1280 Tripterygium wilfordii
unitig_88.g27767 Utricularia gibba
vmacro12798 Vaccinium macrocarpon
vmacro20733 Vaccinium macrocarpon
VMungo1309G0274 Vigna mungo
Zm00001eb362550 Zea mays

User provided reference genes

Program Settings