Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28850 Brassica napus
Aa31LG9G11940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis
Actinidia29387 Actinidia chinensis
AL6G43830 Arabidopsis lyrata
Aqoxy5G00842 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea
AT4G10050 Arabidopsis thaliana
ATR1089G027 Amborella trichopoda
Atru.chr13.2479 Acer truncatum
AUR62034346 Chenopodium quinoa
BcaB01g02766 Brassica carinata
BcaC01g04692 Brassica carinata
BolC3t15799H Brassica oleracea
BraA03t12083Z Brassica rapa
C03p34880 Brassica napus
CAN.G924.3 Capsicum annuum
CANSAT54G1068 Cannabis sativa
Carub.0006s2860 Capsella rubella
Ca_24473_v3 Cicer arietinum L.
CBR_g27970 Chara braunii
CBR_g45928 Chara braunii
Cc10_g08780 Coffea canephora
Cfa008090 Carpinus fangiana
Ciclev10020855m.g Citrus clementina
CiPaw.03G015700 Carya illinoinensis
CiPaw.03G015900 Carya illinoinensis
ClCG08G001020 Citrullus lanatus
COL.COLO4_24570 Corchorus olitorius
Cpa.g.sc21.78 Carica papaya
Cre12.g521250 Chlamydomonas reinhardtii
CsaV3_5G040000 Cucumis sativus L.
CSS0029003 Camellia sinensis var. sinensis
DCAR_017359 Daucus carota
Dinv09391 Davidia involucrata
Duzib268G1319 Durio zibethinus
ECA234G2100 Erigeron canadensis
EL10Ac1g01666 Beta vulgaris
Eucgr.F02979 Eucalyptus grandis
FAN04G1764 Fragaria x ananassa
FAN08G1548 Fragaria x ananassa
FvH4_5g33360 Fragaria vesca
Glyma.01G230800 Glycine max
Glyma.11G014000 Glycine max
Gohir.A05G253500 Gossypium hirsutum
Gohir.D05G255500 Gossypium hirsutum
Gorai.009G266900 Gossypium raimondii
GSVIVG01036383001 Vitis vinifera
HanXRQChr14g0455131 Helianthus annuus
Haze_13948 Corylus avellana
Haze_26337 Corylus avellana
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla
HPP92_005618 Vanilla planifolia
HPP92_005619 Vanilla planifolia
HPP92_005641 Vanilla planifolia
Lalb_Chr09g0320511 Lupinus albus
Lj9A698G57 Lonicera japonica
LjContig00222g0004888 Lotus japonicus
Lsat_1_v5_gn_2_49420 Lactuca sativa
Lsat_1_v5_gn_4_65220 Lactuca sativa
Manes.18G118600 Manihot esculenta
Mapoly0007s0278 Marchantia polymorpha
MBI03_g28420_MAGBIO Magnolia biondii
MCO04G089 Micromonas commoda
MCO06G149 Micromonas commoda
MD08G1213000 Malus domestica
MD15G1395500 Malus domestica
Medtr5g008450 Medicago truncatula
MELO3C022178.2 Cucumis melo
MELO3C033538.2 Cucumis melo
Migut.C01370 Erythranthe guttata
MSTRG.1592 Avicennia marina
Nitab4.5_0000903g0050 Nicotiana tabacum
Nitab4.5_0000999g0010 Nicotiana tabacum
Nitab4.5_0003013g0010 Nicotiana tabacum
Nn179s44626 Nelumbo nucifera
Nn5g27277 Nelumbo nucifera
Oeu023200.3 Olea europaea
Os04g0443500 Oryza sativa ssp. japonica
Peaxi162Scf00078g00423 Petunia axillaris
PGR042G0716 Punica granatum
Phvul.002G036200 Phaseolus vulgaris
Potri.013G099900 Populus trichocarpa
Potri.019G072900 Populus trichocarpa
Pp3c6_4660 Physcomitrium patens
PRCOL_00002994 Prasinoderma coloniale
Prupe.1G544300 Prunus persica
Psat2g187200 Pisum sativum
PSO017G7078 Papaver somniferum
PSO170G3138 Papaver somniferum
QL03p030354 Quercus lobata
QL09p002119 Quercus lobata
RcHm_v2.0_Chr7g0232091 Rosa chinensis
Rhsim02G0145500 Rhododendron simsii
Sabra19G0084300 Salix brachista
SalBow7G1102 Salvia bowleyana
Sc25g0003010 Simmondsia chinensis
Sed0024118 Sechium edule
SEGI_00088 Sequoiadendron giganteum
SEGI_06082 Sequoiadendron giganteum
SEGI_14439 Sequoiadendron giganteum
SEGI_15073 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32601 Striga asiatica
SHI16717 Sapria himalayana
SMO272G0012 Selaginella moellendorffii
SMO356G0681 Selaginella moellendorffii
Solyc11g042430.2 Solanum lycopersicum
Sopen11g018500 Solanum pennellii
Sp6g07420 Schrenkiella parvula
TAR628G1703 Trochodendron aralioides
THA.LOC104815846 Tarenaya hassleriana
Thecc.08G176900 Theobroma cacao
Thhalv10028776m.g Eutrema salsugineum
TPR.G37896 Trifolium pratense
TWI12G1446 Tripterygium wilfordii
TWI75G0925 Tripterygium wilfordii
unitig_8.g4894 Utricularia gibba
vmacro16045 Vaccinium macrocarpon
vmacro16046 Vaccinium macrocarpon
VMungo1215G2765 Vigna mungo
Zm00001eb082080 Zea mays

User provided reference genes

Program Settings