Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35450 Brassica napus
A10p12190 Brassica napus
Aa31LG3G10770 Aethionema arabicum
Actinidia05107 Actinidia chinensis
Ah.04g165770 Amaranthus hybridus
AL8G30300 Arabidopsis lyrata
Aqoxy2G01543 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea
AT5G54855 Arabidopsis thaliana
ATR0752G141 Amborella trichopoda
Atru.chr2.3327 Acer truncatum
Atru.chr2.3388 Acer truncatum
AUR62015736 Chenopodium quinoa
AUR62020475 Chenopodium quinoa
AUR62034264 Chenopodium quinoa
BcaB08g35852 Brassica carinata
BcaC04g20291 Brassica carinata
BraA06t26468Z Brassica rapa
BraA10t43315Z Brassica rapa
C09p45410 Brassica napus
CAN.G416.46 Capsicum annuum
CANSAT11G2101 Cannabis sativa
CARHR268190 Cardamine hirsuta
Carub.0008s1515 Capsella rubella
Ca_14717_v3 Cicer arietinum L.
Cc05_g13560 Coffea canephora
CDE02G3449 Ceratophyllum demersum
CDE05G1373 Ceratophyllum demersum
Cfa020375 Carpinus fangiana
Ciclev10009738m.g Citrus clementina
CiPaw.12G128400 Carya illinoinensis
ClCG10G005510 Citrullus lanatus
Cpa.g.sc97.30 Carica papaya
CsaV3_3G005240 Cucumis sativus L.
CSS0025826 Camellia sinensis var. sinensis
CSS0035522 Camellia sinensis var. sinensis
CSS0046732 Camellia sinensis var. sinensis
DCAR_010044 Daucus carota
Dinv22275 Davidia involucrata
Duzib170G0083 Durio zibethinus
Duzib170G0736 Durio zibethinus
Duzib170G1029 Durio zibethinus
EL10Ac4g07850 Beta vulgaris
Eucgr.F03456 Eucalyptus grandis
FAN11G3779 Fragaria x ananassa
FAN21G0544 Fragaria x ananassa
FAN25G2931 Fragaria x ananassa
FvH4_3g22360 Fragaria vesca
Glyma.08G314400 Glycine max
Glyma.18G099800 Glycine max
Gohir.A01G078500 Gossypium hirsutum
Gohir.A13G138900 Gossypium hirsutum
Gohir.D01G065600 Gossypium hirsutum
Gohir.D13G143700 Gossypium hirsutum
Gorai.002G087500 Gossypium raimondii
Gorai.013G160500 Gossypium raimondii
GSVIVG01037612001 Vitis vinifera
HanXRQChr11g0336301 Helianthus annuus
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla
HPP92_005293 Vanilla planifolia
Hund02079 Selenicereus undatus
Lalb_Chr15g0081001 Lupinus albus
Lj1A870G91 Lonicera japonica
Lj6g0005932 Lotus japonicus
Lsat_1_v5_gn_7_109420 Lactuca sativa
Manes.03G125000 Manihot esculenta
MBI18_g24806_MAGBIO Magnolia biondii
MD03G1206100 Malus domestica
MD11G1221600 Malus domestica
MD13G1085300 Malus domestica
MD13G1229600 Malus domestica
Medtr3g051110 Medicago truncatula
MELO3C031911.2 Cucumis melo
Migut.M01780 Erythranthe guttata
MSTRG.15157 Avicennia marina
Nitab4.5_0000286g0120 Nicotiana tabacum
Nitab4.5_0000296g0120 Nicotiana tabacum
Nitab4.5_0000653g0030 Nicotiana tabacum
Nitab4.5_0000749g0130 Nicotiana tabacum
Nitab4.5_0001604g0080 Nicotiana tabacum
Nitab4.5_0004336g0030 Nicotiana tabacum
Nn1g03576 Nelumbo nucifera
Oeu062597.2 Olea europaea
Os02g0317800 Oryza sativa ssp. japonica
Peaxi162Scf00450g00732 Petunia axillaris
PGR031G1917 Punica granatum
PGSC0003DMG400001097 Solanum tuberosum
Phvul.005G120100 Phaseolus vulgaris
Phvul.006G040400 Phaseolus vulgaris
Potri.011G137100 Populus trichocarpa
Prupe.4G210000 Prunus persica
Psat5g192520 Pisum sativum
PSO541G1528 Papaver somniferum
PSO675G3423 Papaver somniferum
QL08p011516 Quercus lobata
RcHm_v2.0_Chr5g0038871 Rosa chinensis
RcHm_v2.0_Chr5g0038891 Rosa chinensis
RhsimUnG0251700 Rhododendron simsii
Sabra11G0123000 Salix brachista
Sabra16G0288000 Salix brachista
SalBow5G1944 Salvia bowleyana
SalBow7G3069 Salvia bowleyana
SalBow7G4274 Salvia bowleyana
Sc03g0008720 Simmondsia chinensis
Sed0021211 Sechium edule
SEGI_29279 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03986 Striga asiatica
Solyc12g005150.2 Solanum lycopersicum
Sopen12g001140 Solanum pennellii
Sp6g16820 Schrenkiella parvula
TAR626G0847 Trochodendron aralioides
TAR629G1817 Trochodendron aralioides
THA.LOC104817659 Tarenaya hassleriana
Thecc.07G043100 Theobroma cacao
Thhalv10014954m.g Eutrema salsugineum
TPR.G13209 Trifolium pratense
TWI39G1057 Tripterygium wilfordii
unitig_8.g4602 Utricularia gibba
vmacro09731 Vaccinium macrocarpon
VMungo0540G0475 Vigna mungo
Zm00001eb178010 Zea mays

User provided reference genes

Program Settings