Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13940 Brassica napus
Aa31LG3G11530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1902 Anthoceros agrestis
Actinidia00093 Actinidia chinensis
Actinidia05032 Actinidia chinensis
Ah.04g166440 Amaranthus hybridus
AL8G31150 Arabidopsis lyrata
Aqoxy4G02215 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea
AT5G55580 Arabidopsis thaliana
ATR1149G086 Amborella trichopoda
Atru.chr2.3605 Acer truncatum
AUR62017060 Chenopodium quinoa
AUR62040658 Chenopodium quinoa
BcaB01g04358 Brassica carinata
BcaC01g06383 Brassica carinata
BcaC06g36347 Brassica carinata
BcaNung06724 Brassica carinata
BcaNung06726 Brassica carinata
BolC2t07758H Brassica oleracea
BolC3t14060H Brassica oleracea
BraA03t10695Z Brassica rapa
C03p16380 Brassica napus
CAN.G1239.14 Capsicum annuum
CAN.G489.2 Capsicum annuum
CANSAT11G2145 Cannabis sativa
CARHR268890 Cardamine hirsuta
Carub.0008s1595 Capsella rubella
Ca_06374_v3 Cicer arietinum L.
Cc05_g14700 Coffea canephora
CDE12G0728 Ceratophyllum demersum
Cfa020229 Carpinus fangiana
Ciclev10008511m.g Citrus clementina
CiPaw.11G201000 Carya illinoinensis
CiPaw.12G136000 Carya illinoinensis
ClCG09G021120 Citrullus lanatus
COL.COLO4_09787 Corchorus olitorius
Cpa.g.sc12.192 Carica papaya
Cpa.g.sc12.193 Carica papaya
CsaV3_7G018450 Cucumis sativus L.
CSS0002313 Camellia sinensis var. sinensis
DCAR_013215 Daucus carota
Dinv40835 Davidia involucrata
ECA246G2030 Erigeron canadensis
EL10Ac4g07613 Beta vulgaris
Eucgr.F03524 Eucalyptus grandis
FAN11G0689 Fragaria x ananassa
FAN21G2064 Fragaria x ananassa
FAN25G1123 Fragaria x ananassa
FAN25G3289 Fragaria x ananassa
FvH4_3g24060 Fragaria vesca
Glyma.02G297900 Glycine max
Glyma.14G015800 Glycine max
Gohir.A13G134866 Gossypium hirsutum
Gohir.D13G138500 Gossypium hirsutum
Gorai.013G155100 Gossypium raimondii
GSVIVG01037780001 Vitis vinifera
HanXRQChr08g0235811 Helianthus annuus
Haze_09788 Corylus avellana
HPP92_007883 Vanilla planifolia
HPP92_007898 Vanilla planifolia
HPP92_007899 Vanilla planifolia
Hund01916 Selenicereus undatus
Hund01917 Selenicereus undatus
Lalb_Chr04g0247971 Lupinus albus
Lj1A885G30 Lonicera japonica
LjContig00272g0005215 Lotus japonicus
Lsat_1_v5_gn_5_8060 Lactuca sativa
Manes.15G063200 Manihot esculenta
Mapoly0042s0040 Marchantia polymorpha
MBI16_g11566_MAGBIO Magnolia biondii
MCO01G181 Micromonas commoda
MD03G1188700 Malus domestica
MD11G1204700 Malus domestica
Medtr5g094610 Medicago truncatula
MELO3C024909.2 Cucumis melo
Migut.M01675 Erythranthe guttata
MSTRG.6985 Avicennia marina
Nitab4.5_0000163g0310 Nicotiana tabacum
Nitab4.5_0002517g0040 Nicotiana tabacum
Nn1g07440 Nelumbo nucifera
Oeu031063.1 Olea europaea
Oeu034554.1 Olea europaea
Oeu054328.1 Olea europaea
Os07g0583200 Oryza sativa ssp. japonica
Peaxi162Scf00955g00214 Petunia axillaris
PGR031G1939 Punica granatum
PGSC0003DMG401029813 Solanum tuberosum
PGSC0003DMG402029813 Solanum tuberosum
Phvul.008G275700 Phaseolus vulgaris
Potri.001G361800 Populus trichocarpa
Pp3c11_22990 Physcomitrium patens
Pp3c7_3780 Physcomitrium patens
PRCOL_00000825 Prasinoderma coloniale
Prupe.4G234100 Prunus persica
Prupe.4G234400 Prunus persica
Psat2g008800 Pisum sativum
PSO541G2941 Papaver somniferum
PSO675G2716 Papaver somniferum
QL08p005504 Quercus lobata
RcHm_v2.0_Chr5g0042641 Rosa chinensis
Rhsim06G0226800 Rhododendron simsii
Sabra11G0073300 Salix brachista
Sabra11G0078800 Salix brachista
SalBow8G0989 Salvia bowleyana
Sc16g0003560 Simmondsia chinensis
Sed0021870 Sechium edule
SGA_v2.0_scaffold171G38887 Striga asiatica
Solyc12g015640.2 Solanum lycopersicum
Sopen12g007540 Solanum pennellii
Sp6g17500 Schrenkiella parvula
TAR626G0559 Trochodendron aralioides
THA.LOC104813444 Tarenaya hassleriana
Thecc.07G022300 Theobroma cacao
Thhalv10013311m.g Eutrema salsugineum
TPR.G14154 Trifolium pratense
TWI39G0040 Tripterygium wilfordii
unitig_899.g15274 Utricularia gibba
vmacro10144 Vaccinium macrocarpon
vmacro11560 Vaccinium macrocarpon
VMungo0647G1066 Vigna mungo
VMungo1080G1759 Vigna mungo
Zm00001eb107900 Zea mays

User provided reference genes

Program Settings