Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20330 Brassica napus
A05p08950 Brassica napus
Aa31LG5G22150 Aethionema arabicum
Actinidia08770 Actinidia chinensis
AL4G33170 Arabidopsis lyrata
Aqoxy1G01150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea
AT2G36930 Arabidopsis thaliana
ATR0219G007 Amborella trichopoda
Atru.chr8.1798 Acer truncatum
AUR62040339 Chenopodium quinoa
AUR62042508 Chenopodium quinoa
BcaB01g03807 Brassica carinata
BcaB02g09320 Brassica carinata
BcaC01g05620 Brassica carinata
BcaC02g11815 Brassica carinata
BolC3t14781H Brassica oleracea
BolC4t22754H Brassica oleracea
BraA03t11279Z Brassica rapa
BraA05t19857Z Brassica rapa
C03p23890 Brassica napus
C04p11060 Brassica napus
CAN.G900.29 Capsicum annuum
CANSAT80G0535 Cannabis sativa
CARHR131400 Cardamine hirsuta
Carub.0004s1878 Capsella rubella
Ca_11505_v3 Cicer arietinum L.
CBR_g8310 Chara braunii
Cc06_g04250 Coffea canephora
CDE09G0874 Ceratophyllum demersum
Cfa017617 Carpinus fangiana
Ciclev10013228m.g Citrus clementina
CiPaw.10G129500 Carya illinoinensis
ClCG04G009390 Citrullus lanatus
COL.COLO4_26955 Corchorus olitorius
Cre17.g734628 Chlamydomonas reinhardtii
CsaV3_6G039970 Cucumis sativus L.
CSS0018897 Camellia sinensis var. sinensis
CSS0028691 Camellia sinensis var. sinensis
DCAR_015000 Daucus carota
Duzib093G0849 Durio zibethinus
ECA248G0052 Erigeron canadensis
EL10Ac7g16636 Beta vulgaris
FAN02G2429 Fragaria x ananassa
FAN05G0981 Fragaria x ananassa
FAN14G2797 Fragaria x ananassa
FAN14G3008 Fragaria x ananassa
FvH4_6g16440 Fragaria vesca
Glyma.10G055200 Glycine max
Glyma.13G142300 Glycine max
Gohir.A01G213500 Gossypium hirsutum
Gohir.D01G202200 Gossypium hirsutum
Gorai.002G246900 Gossypium raimondii
GSVIVG01033644001 Vitis vinifera
HanXRQChr01g0027751 Helianthus annuus
HanXRQChr15g0491571 Helianthus annuus
HanXRQChr16g0526221 Helianthus annuus
Haze_20546 Corylus avellana
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla
HPP92_025806 Vanilla planifolia
Hund20380 Selenicereus undatus
Hund26578 Selenicereus undatus
Lalb_Chr02g0155801 Lupinus albus
Lj3A986G82 Lonicera japonica
Lj5g0001377 Lotus japonicus
Lsat_1_v5_gn_1_52340 Lactuca sativa
Manes.08G011000 Manihot esculenta
Manes.09G065800 Manihot esculenta
Mapoly0185s0018 Marchantia polymorpha
MCO09G543 Micromonas commoda
MD00G1155400 Malus domestica
MD12G1112600 Malus domestica
Medtr1g063190 Medicago truncatula
MELO3C024474.2 Cucumis melo
Migut.J00654 Erythranthe guttata
MSTRG.19181 Avicennia marina
MSTRG.5764 Avicennia marina
Nitab4.5_0000814g0040 Nicotiana tabacum
Nitab4.5_0003861g0010 Nicotiana tabacum
Nitab4.5_0029554g0010 Nicotiana tabacum
Nn2g13802 Nelumbo nucifera
Nn6g35286 Nelumbo nucifera
Oeu005023.1 Olea europaea
Oeu041490.2 Olea europaea
Os08g0564500 Oryza sativa ssp. japonica
Peaxi162Scf00311g00119 Petunia axillaris
Peaxi162Scf00638g00414 Petunia axillaris
PGR004G0793 Punica granatum
PGSC0003DMG400003863 Solanum tuberosum
Phvul.007G219000 Phaseolus vulgaris
Potri.006G124100 Populus trichocarpa
Potri.016G093500 Populus trichocarpa
Pp3c13_22060 Physcomitrium patens
PRCOL_00003735 Prasinoderma coloniale
Prupe.7G129700 Prunus persica
Psat6g074040 Pisum sativum
PSO063G3287 Papaver somniferum
PSO339G4301 Papaver somniferum
QL07p043219 Quercus lobata
RcHm_v2.0_Chr3g0470301 Rosa chinensis
Rhsim03G0091200 Rhododendron simsii
Sabra06G0098200 Salix brachista
Sabra16G0098600 Salix brachista
Sc20g0005520 Simmondsia chinensis
Sed0015731 Sechium edule
SEGI_04945 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15520 Striga asiatica
SGA_v2.0_scaffold75G24848 Striga asiatica
SMO144G0185 Selaginella moellendorffii
Solyc09g008230.3 Solanum lycopersicum
Sopen09g003050 Solanum pennellii
Sp4g19220 Schrenkiella parvula
THA.LOC104823475 Tarenaya hassleriana
Thecc.05G067500 Theobroma cacao
Thhalv10017435m.g Eutrema salsugineum
TPR.G11267 Trifolium pratense
TWI74G0214 Tripterygium wilfordii
TWI77G0881 Tripterygium wilfordii
unitig_749.g14285 Utricularia gibba
unitig_75.g29315 Utricularia gibba
vmacro07293 Vaccinium macrocarpon
VMungo0720G3134 Vigna mungo
Zm00001eb038700 Zea mays

User provided reference genes

Program Settings