Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p26360 Brassica napus
A10p21920 Brassica napus
Aa31LG5G13890 Aethionema arabicum
AL288U10020 Arabidopsis lyrata
AL3G12980 Arabidopsis lyrata
AL6G28540 Arabidopsis lyrata
Aqoxy5G01129 Aquilegia oxysepala
Aqoxy7G00636 Aquilegia oxysepala
Aqoxy7G00638 Aquilegia oxysepala
AT3G03341 Arabidopsis thaliana
AUR62023191 Chenopodium quinoa
AUR62023192 Chenopodium quinoa
AUR62023238 Chenopodium quinoa
AUR62023239 Chenopodium quinoa
BcaC04g18789 Brassica carinata
BcaC05g30279 Brassica carinata
BcaC09g47741 Brassica carinata
BcaC09g47742 Brassica carinata
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus
BolC1t05835H Brassica oleracea
BolC9t58806H Brassica oleracea
BraA01t04584Z Brassica rapa
BraA10t44251Z Brassica rapa
C09p59670 Brassica napus
CANSAT78G0649 Cannabis sativa
CARHR077390 Cardamine hirsuta
CARHR195740 Cardamine hirsuta
Carub.0003s0252 Capsella rubella
Carub.0006s1569 Capsella rubella
Ca_08164_v3 Cicer arietinum L.
Cc07_g08170 Coffea canephora
Cfa007843 Carpinus fangiana
Ciclev10013249m.g Citrus clementina
CiPaw.03G068600 Carya illinoinensis
ClCG05G010950 Citrullus lanatus
Cpa.g.sc604.3 Carica papaya
Cre03.g207100 Chlamydomonas reinhardtii
Cre03.g207152 Chlamydomonas reinhardtii
Cre13.g575701 Chlamydomonas reinhardtii
CsaV3_1G027840 Cucumis sativus L.
CsaV3_3G021640 Cucumis sativus L.
CSS0019264 Camellia sinensis var. sinensis
CSS0043713 Camellia sinensis var. sinensis
DCAR_015248 Daucus carota
Dinv19010 Davidia involucrata
ECA238G0319 Erigeron canadensis
EL10Ac2g04484 Beta vulgaris
Eucgr.F02822 Eucalyptus grandis
FAN15G1984 Fragaria x ananassa
FAN27G3274 Fragaria x ananassa
FvH4_5g32381 Fragaria vesca
Glyma.11G218400 Glycine max
Glyma.18G038851 Glycine max
GSVIVG01030860001 Vitis vinifera
HanXRQChr07g0193741 Helianthus annuus
Haze_14223 Corylus avellana
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla
Lalb_Chr10g0104491 Lupinus albus
Lalb_Chr10g0104501 Lupinus albus
Lj6g0018768 Lotus japonicus
Lsat_1_v5_gn_2_81461 Lactuca sativa
Manes.02G074600 Manihot esculenta
Mapoly0009s0147 Marchantia polymorpha
Mapoly0046s0058 Marchantia polymorpha
Mapoly0046s0059 Marchantia polymorpha
MD09G1261500 Malus domestica
Medtr3g067715 Medicago truncatula
Medtr3g067720 Medicago truncatula
MELO3C020290.2 Cucumis melo
MELO3C020291.2 Cucumis melo
Migut.L00468 Erythranthe guttata
Nitab4.5_0004399g0060 Nicotiana tabacum
Nn3g18216 Nelumbo nucifera
Nn4g24140 Nelumbo nucifera
Os01g0644200 Oryza sativa ssp. japonica
Peaxi162Scf00118g00018 Petunia axillaris
PGR042G3666 Punica granatum
PGSC0003DMG400030646 Solanum tuberosum
Phvul.001G231901 Phaseolus vulgaris
Potri.017G128600 Populus trichocarpa
Pp3c19_5460 Physcomitrium patens
Pp3c19_5500 Physcomitrium patens
Pp3c19_9840 Physcomitrium patens
Pp3c21_13210 Physcomitrium patens
Pp3c23_9530 Physcomitrium patens
Pp3c24_9690 Physcomitrium patens
Pp3c4_12160 Physcomitrium patens
Pp3c8_12730 Physcomitrium patens
Pp3c8_12731 Physcomitrium patens
Prupe.3G158900 Prunus persica
PSO017G0604 Papaver somniferum
PSO017G3771 Papaver somniferum
PSO478G0303 Papaver somniferum
PSO478G4394 Papaver somniferum
QL11p004106 Quercus lobata
RcHm_v2.0_Chr1g0370661 Rosa chinensis
Rhsim08G0086000 Rhododendron simsii
SalBow7G1639 Salvia bowleyana
Sed0002962 Sechium edule
SEGI_20637 Sequoiadendron giganteum
SEGI_23307 Sequoiadendron giganteum
SEGI_27045 Sequoiadendron giganteum
SMO111G0099 Selaginella moellendorffii
SMO111G0149 Selaginella moellendorffii
SMO111G0160 Selaginella moellendorffii
SMO111G0173 Selaginella moellendorffii
SMO293G0011 Selaginella moellendorffii
Solyc02g091390.3 Solanum lycopersicum
Sopen02g036010 Solanum pennellii
Sp3g02370 Schrenkiella parvula
TAR371G0259 Trochodendron aralioides
TAR371G0317 Trochodendron aralioides
TAR371G0323 Trochodendron aralioides
TAR371G0835 Trochodendron aralioides
TAR371G0913 Trochodendron aralioides
TAR371G1269 Trochodendron aralioides
TAR629G2663 Trochodendron aralioides
THA.LOC104820840 Tarenaya hassleriana
Thecc.04G121100 Theobroma cacao
Thhalv10015148m.g Eutrema salsugineum
Thhalv10022211m.g Eutrema salsugineum
TPR.G15845 Trifolium pratense
Zm00001eb158640 Zea mays

User provided reference genes

Program Settings