Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40510 Brassica napus
Aa31LG2G4610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis
Actinidia06053 Actinidia chinensis
Actinidia36049 Actinidia chinensis
Actinidia36050 Actinidia chinensis
AL5G18090 Arabidopsis lyrata
Aqoxy3G00846 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea
AT3G28460 Arabidopsis thaliana
ATR0665G567 Amborella trichopoda
Atru.chr8.2465 Acer truncatum
AUR62018326 Chenopodium quinoa
AUR62030560 Chenopodium quinoa
BcaC06g33735 Brassica carinata
BolC7t44265H Brassica oleracea
BraA06t26970Z Brassica rapa
C07p37520 Brassica napus
CAN.G1128.11 Capsicum annuum
CANSAT64G2331 Cannabis sativa
CARHR292500 Cardamine hirsuta
Carub.0005s0699 Capsella rubella
Ca_04243_v3 Cicer arietinum L.
CBR_g31858 Chara braunii
Cc07_g02850 Coffea canephora
CDE02G1577 Ceratophyllum demersum
Cfa007492 Carpinus fangiana
Ciclev10012231m.g Citrus clementina
CiPaw.03G032300 Carya illinoinensis
ClCG09G018520 Citrullus lanatus
COL.COLO4_36989 Corchorus olitorius
Cpa.g.sc14.61 Carica papaya
Cpa.g.sc14.62 Carica papaya
Cre13.g566300 Chlamydomonas reinhardtii
CsaV3_5G037720 Cucumis sativus L.
CSS0001127 Camellia sinensis var. sinensis
CSS0004781 Camellia sinensis var. sinensis
CSS0033350 Camellia sinensis var. sinensis
CSS0040499 Camellia sinensis var. sinensis
CSS0043817 Camellia sinensis var. sinensis
DCAR_006717 Daucus carota
Dinv35002 Davidia involucrata
Duzib264G0249 Durio zibethinus
ECA232G4812 Erigeron canadensis
EL10Ac2g02902 Beta vulgaris
Eucgr.I01896 Eucalyptus grandis
FAN02G4063 Fragaria x ananassa
FAN05G1688 Fragaria x ananassa
FAN09G0258 Fragaria x ananassa
FAN14G5872 Fragaria x ananassa
FvH4_6g49670 Fragaria vesca
Glyma.13G066900 Glycine max
Glyma.19G017500 Glycine max
Gohir.A07G216800 Gossypium hirsutum
Gohir.D07G223600 Gossypium hirsutum
Gorai.001G257900 Gossypium raimondii
GSVIVG01032566001 Vitis vinifera
HanXRQChr15g0488521 Helianthus annuus
Haze_14607 Corylus avellana
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla
HPP92_023566 Vanilla planifolia
Hund13291 Selenicereus undatus
Lalb_Chr21g0319131 Lupinus albus
Lj2g0012157 Lotus japonicus
Lj7A404T37 Lonicera japonica
Lj7A404T38 Lonicera japonica
Lsat_1_v5_gn_4_180280 Lactuca sativa
Lsat_1_v5_gn_7_34121 Lactuca sativa
Manes.15G178000 Manihot esculenta
Mapoly0140s0031 Marchantia polymorpha
MBI01_g13068_MAGBIO Magnolia biondii
MBI01_g13070_MAGBIO Magnolia biondii
MCO03G139 Micromonas commoda
MD09G1042700 Malus domestica
MD17G1044100 Malus domestica
MD17G1044200 Malus domestica
Medtr6g009400 Medicago truncatula
MELO3C021484.2 Cucumis melo
Migut.H00876 Erythranthe guttata
MSTRG.23964 Avicennia marina
Nitab4.5_0001727g0150 Nicotiana tabacum
Nitab4.5_0003431g0070 Nicotiana tabacum
Nn1g08819 Nelumbo nucifera
Oeu022866.3 Olea europaea
Os03g0736400 Oryza sativa ssp. japonica
Peaxi162Scf00059g00128 Petunia axillaris
PGR142G2438 Punica granatum
PGSC0003DMG400006900 Solanum tuberosum
Phvul.004G023900 Phaseolus vulgaris
Potri.001G349800 Populus trichocarpa
Pp3c7_630 Physcomitrium patens
PRCOL_00006620 Prasinoderma coloniale
Prupe.3G275100 Prunus persica
Psat1g076480 Pisum sativum
PSO161G0076 Papaver somniferum
PSO478G2838 Papaver somniferum
QL02p079411 Quercus lobata
RcHm_v2.0_Chr2g0169691 Rosa chinensis
Rhsim10G0029400 Rhododendron simsii
Sabra16G0229200 Salix brachista
SalBow1G5247 Salvia bowleyana
Sc10g0004040 Simmondsia chinensis
Sed0011674 Sechium edule
SEGI_25544 Sequoiadendron giganteum
SEGI_38692 Sequoiadendron giganteum
SGA_v2.0_scaffold205G41750 Striga asiatica
SMO171G0075 Selaginella moellendorffii
Solyc01g057060.1 Solanum lycopersicum
Solyc02g067540.3 Solanum lycopersicum
Sopen01g021310 Solanum pennellii
Sopen02g016670 Solanum pennellii
Sp2g17230 Schrenkiella parvula
TAR371G0222 Trochodendron aralioides
TAR629G3263 Trochodendron aralioides
THA.LOC104823923 Tarenaya hassleriana
Thecc.04G069300 Theobroma cacao
Thhalv10004634m.g Eutrema salsugineum
TPR.G32608 Trifolium pratense
TWI56G0494 Tripterygium wilfordii
unitig_744.g24344 Utricularia gibba
vmacro05779 Vaccinium macrocarpon
VMungo0464G0451 Vigna mungo
Zm00001eb215320 Zea mays

User provided reference genes

Program Settings