Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31510 Brassica napus
Aa31LG1G17180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1007 Anthoceros agrestis
Actinidia09815 Actinidia chinensis
Ah.03g140160 Amaranthus hybridus
AL4G16230 Arabidopsis lyrata
AL8G42180 Arabidopsis lyrata
Aqoxy6G00390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DL1CJS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2AKZ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NYPU2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9YLZ5 Arachis hypogaea
AT5G64730 Arabidopsis thaliana
ATR0311G002 Amborella trichopoda
Atru.chr4.619 Acer truncatum
AUR62003640 Chenopodium quinoa
AUR62017950 Chenopodium quinoa
BcaB02g09817 Brassica carinata
BcaB02g09845 Brassica carinata
BcaC01g02704 Brassica carinata
BolC3t18404H Brassica oleracea
BraA06t26090Z Brassica rapa
C03p61450 Brassica napus
CANSAT01G2305 Cannabis sativa
CARHR278720 Cardamine hirsuta
Carub.0008s2554 Capsella rubella
Ca_17667_v3 Cicer arietinum L.
CBR_g30933 Chara braunii
Cc07_g16870 Coffea canephora
CDE08G0124 Ceratophyllum demersum
Cfa002800 Carpinus fangiana
Cfa023960 Carpinus fangiana
Ciclev10026172m.g Citrus clementina
CiPaw.03G130500 Carya illinoinensis
CiPaw.09G145300 Carya illinoinensis
CiPaw.15G162200 Carya illinoinensis
COL.COLO4_22379 Corchorus olitorius
Cpa.g.sc72.36 Carica papaya
Cre16.g675301 Chlamydomonas reinhardtii
CsaV3_6G042010 Cucumis sativus L.
CSS0010804 Camellia sinensis var. sinensis
DCAR_011471 Daucus carota
Dinv02715 Davidia involucrata
Duzib187G0475 Durio zibethinus
ECA238G4454 Erigeron canadensis
EL10Ac6g15234 Beta vulgaris
Eucgr.H04894 Eucalyptus grandis
FAN05G3385 Fragaria x ananassa
FAN19G1422 Fragaria x ananassa
FAN26G1413 Fragaria x ananassa
FAN28G2007 Fragaria x ananassa
FvH4_1g23870 Fragaria vesca
FvH4_6g20551 Fragaria vesca
Glyma.05G187400 Glycine max
Glyma.08G145700 Glycine max
Gohir.A08G035600 Gossypium hirsutum
Gohir.D08G046300 Gossypium hirsutum
Gorai.004G045500 Gossypium raimondii
GSVIVG01016788001 Vitis vinifera
HanXRQChr07g0201191 Helianthus annuus
Haze_25101 Corylus avellana
Hma1.2p1_0253F.1_g102940 Hydrangea macrophylla
Hma1.2p1_0253F.1_g102950 Hydrangea macrophylla
HPP92_016153 Vanilla planifolia
Hund19623 Selenicereus undatus
Lalb_Chr12g0203371 Lupinus albus
Lj2A575G41 Lonicera japonica
Lj4g0013268 Lotus japonicus
Lsat_1_v5_gn_2_116520 Lactuca sativa
Lsat_1_v5_gn_2_45481 Lactuca sativa
Lsat_1_v5_gn_6_59821 Lactuca sativa
Lsat_1_v5_gn_7_93000 Lactuca sativa
Lsat_1_v5_gn_8_143080 Lactuca sativa
Lsat_1_v5_gn_9_87941 Lactuca sativa
Manes.12G148000 Manihot esculenta
Manes.12G148300 Manihot esculenta
Mapoly0011s0172 Marchantia polymorpha
MBI09_g02046_MAGBIO Magnolia biondii
MCO04G315 Micromonas commoda
MD15G1340800 Malus domestica
Medtr8g092620 Medicago truncatula
MELO3C008023.2 Cucumis melo
Migut.L00052 Erythranthe guttata
MSTRG.3821 Avicennia marina
Nitab4.5_0001582g0080 Nicotiana tabacum
Nitab4.5_0002138g0060 Nicotiana tabacum
Oeu015836.1 Olea europaea
Os02g0543400 Oryza sativa ssp. japonica
Peaxi162Scf00025g02621 Petunia axillaris
Peaxi162Scf01159g00015 Petunia axillaris
PGR102G2076 Punica granatum
PGSC0003DMG400003975 Solanum tuberosum
Phvul.002G268300 Phaseolus vulgaris
Potri.001G306500 Populus trichocarpa
Pp3c23_12950 Physcomitrium patens
PRCOL_00003041 Prasinoderma coloniale
Prupe.6G161500 Prunus persica
Psat7g048920 Pisum sativum
PSO675G2196 Papaver somniferum
QL08p047156 Quercus lobata
RcHm_v2.0_Chr2g0119791 Rosa chinensis
RcHm_v2.0_Chr2g0119831 Rosa chinensis
RcHm_v2.0_Chr6g0259141 Rosa chinensis
Rhsim08G0004200 Rhododendron simsii
Sabra16G0192700 Salix brachista
SalBow5G5416 Salvia bowleyana
Sc03g0004640 Simmondsia chinensis
Sed0026374 Sechium edule
SEGI_20850 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17683 Striga asiatica
SMO361G0710 Selaginella moellendorffii
Solyc11g005550.2 Solanum lycopersicum
Sopen11g001520 Solanum pennellii
Sp2g27800 Schrenkiella parvula
TAR628G1086 Trochodendron aralioides
THA.LOC104799376 Tarenaya hassleriana
Thecc.01G118500 Theobroma cacao
Thhalv10004678m.g Eutrema salsugineum
TPR.G2201 Trifolium pratense
TWI79G0409 Tripterygium wilfordii
unitig_37.g12838 Utricularia gibba
vmacro18651 Vaccinium macrocarpon
VMungo0251G0154 Vigna mungo
Zm00001eb181820 Zea mays

User provided reference genes

Program Settings