Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55620 Brassica napus
Aa31LG4G9870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis
Actinidia14610 Actinidia chinensis
Actinidia15677 Actinidia chinensis
Ah.12g064110 Amaranthus hybridus
Aqoxy2G01745 Aquilegia oxysepala
Aqoxy3G04235 Aquilegia oxysepala
Aqoxy7G02159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea
AT2G25530 Arabidopsis thaliana
ATR0322G019 Amborella trichopoda
Atru.chr7.2397 Acer truncatum
AUR62024907 Chenopodium quinoa
AUR62030635 Chenopodium quinoa
AUR62032542 Chenopodium quinoa
AUR62032544 Chenopodium quinoa
BcaB08g35187 Brassica carinata
BcaC07g40864 Brassica carinata
BolC8t51433H Brassica oleracea
BraA09t40964Z Brassica rapa
C08p38620 Brassica napus
CAN.G1230.11 Capsicum annuum
CANSAT01G2886 Cannabis sativa
CARHR115890 Cardamine hirsuta
Carub.0004s0522 Capsella rubella
Ca_12935_v3 Cicer arietinum L.
Cc08_g00870 Coffea canephora
CDE02G3972 Ceratophyllum demersum
Cfa013165 Carpinus fangiana
Ciclev10008199m.g Citrus clementina
Ciclev10010827m.g Citrus clementina
CiPaw.08G012100 Carya illinoinensis
CiPaw.08G050500 Carya illinoinensis
ClCG05G017010 Citrullus lanatus
COL.COLO4_18834 Corchorus olitorius
Cpa.g.sc115.3 Carica papaya
Cre08.g360850 Chlamydomonas reinhardtii
CsaV3_3G046490 Cucumis sativus L.
CSS0016076 Camellia sinensis var. sinensis
CSS0045540 Camellia sinensis var. sinensis
CSS0049939 Camellia sinensis var. sinensis
DCAR_001526 Daucus carota
Dinv30158 Davidia involucrata
Duzib187G0955 Durio zibethinus
ECA233G5545 Erigeron canadensis
EL10Ac2g02614 Beta vulgaris
Eucgr.C02791 Eucalyptus grandis
Eucgr.C02795 Eucalyptus grandis
FAN15G1390 Fragaria x ananassa
FAN16G3505 Fragaria x ananassa
FAN24G2390 Fragaria x ananassa
FAN27G0392 Fragaria x ananassa
FvH4_2g29360 Fragaria vesca
Glyma.17G209600 Glycine max
Gohir.A07G027600 Gossypium hirsutum
Gohir.D07G031600 Gossypium hirsutum
Gorai.001G033000 Gossypium raimondii
GSVIVG01035836001 Vitis vinifera
HanXRQChr13g0403421 Helianthus annuus
Haze_21537 Corylus avellana
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla
HPP92_009845 Vanilla planifolia
Hund04535 Selenicereus undatus
Lalb_Chr24g0402221 Lupinus albus
Lj5g0005549 Lotus japonicus
Lj7A720G77 Lonicera japonica
Lsat_1_v5_gn_6_22441 Lactuca sativa
Manes.03G016200 Manihot esculenta
Mapoly0085s0040 Marchantia polymorpha
MBI01_g37798_MAGBIO Magnolia biondii
MD08G1148100 Malus domestica
Medtr1g012370 Medicago truncatula
MELO3C003691.2 Cucumis melo
Migut.E01793 Erythranthe guttata
MSTRG.1719 Avicennia marina
Nitab4.5_0000109g0260 Nicotiana tabacum
Nitab4.5_0005761g0100 Nicotiana tabacum
Nitab4.5_0005761g0120 Nicotiana tabacum
Nn8g39429 Nelumbo nucifera
Oeu036562.1 Olea europaea
Os03g0851900 Oryza sativa ssp. japonica
Peaxi162Scf00643g00324 Petunia axillaris
PGR044G2505 Punica granatum
PGSC0003DMG400020474 Solanum tuberosum
Phvul.001G051900 Phaseolus vulgaris
Potri.006G252300 Populus trichocarpa
Pp3c7_12170 Physcomitrium patens
PRCOL_00004860 Prasinoderma coloniale
Prupe.1G479100 Prunus persica
Psat6g029600 Pisum sativum
PSO170G4475 Papaver somniferum
PSO455G0002 Papaver somniferum
QL02p022136 Quercus lobata
RcHm_v2.0_Chr5g0043701 Rosa chinensis
RcHm_v2.0_Chr5g0072341 Rosa chinensis
RcHm_v2.0_Chr6g0298181 Rosa chinensis
Rhsim07G0157100 Rhododendron simsii
Sabra06G0197200 Salix brachista
SalBow1G3525 Salvia bowleyana
Sc23g0006860 Simmondsia chinensis
Sed0015882 Sechium edule
SEGI_08944 Sequoiadendron giganteum
SEGI_12197 Sequoiadendron giganteum
SEGI_20208 Sequoiadendron giganteum
SEGI_28606 Sequoiadendron giganteum
SEGI_39583 Sequoiadendron giganteum
SGA_v2.0_scaffold163G37988 Striga asiatica
SMO228G0075 Selaginella moellendorffii
Solyc06g066090.3 Solanum lycopersicum
Sopen06g024570 Solanum pennellii
Sp4g04810 Schrenkiella parvula
TAR626G0443 Trochodendron aralioides
THA.LOC104803671 Tarenaya hassleriana
Thecc.09G027300 Theobroma cacao
Thhalv10000103m.g Eutrema salsugineum
TPR.G15678 Trifolium pratense
TWI32G0327 Tripterygium wilfordii
unitig_37.g12933 Utricularia gibba
vmacro05185 Vaccinium macrocarpon
VMungo0647G0488 Vigna mungo
Zm00001eb064690 Zea mays

User provided reference genes

Program Settings