Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19640 Brassica napus
Aa31LG2G22090 Aethionema arabicum
Actinidia09902 Actinidia chinensis
Actinidia12458 Actinidia chinensis
Ah.01g003530 Amaranthus hybridus
AL7G24370 Arabidopsis lyrata
Aqoxy1G03895 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea
AT4G28230 Arabidopsis thaliana
ATR0693G210 Amborella trichopoda
Atru.chr6.3075 Acer truncatum
Atru.chr6.3076 Acer truncatum
AUR62037610 Chenopodium quinoa
BcaC09g50504 Brassica carinata
BcaNung01587 Brassica carinata
BolC1t02416H Brassica oleracea
BraA01t01897Z Brassica rapa
C01p24670 Brassica napus
CAN.G508.22 Capsicum annuum
CARHR235940 Cardamine hirsuta
Carub.0007s1253 Capsella rubella
Ca_18074_v3 Cicer arietinum L.
Cc05_g06260 Coffea canephora
CDE10G0475 Ceratophyllum demersum
Cfa014544 Carpinus fangiana
Ciclev10015289m.g Citrus clementina
CiPaw.04G122700 Carya illinoinensis
ClCG02G017320 Citrullus lanatus
COL.COLO4_13683 Corchorus olitorius
Cpa.g.sc34.90 Carica papaya
CsaV3_6G012420 Cucumis sativus L.
DCAR_009725 Daucus carota
DCAR_012977 Daucus carota
Dinv15495 Davidia involucrata
Duzib132G0414 Durio zibethinus
Duzib248G1395 Durio zibethinus
ECA232G2383 Erigeron canadensis
EL10Ac9g20938 Beta vulgaris
Eucgr.A01776 Eucalyptus grandis
FAN02G4384 Fragaria x ananassa
FAN09G0359 Fragaria x ananassa
FAN14G1414 Fragaria x ananassa
FvH4_6g12751 Fragaria vesca
FvH4_6g44570 Fragaria vesca
FvH4_6g44594 Fragaria vesca
Glyma.04G132700 Glycine max
Glyma.11G158800 Glycine max
Gohir.A03G160000 Gossypium hirsutum
Gohir.D02G183100 Gossypium hirsutum
Gorai.005G205500 Gossypium raimondii
GSVIVG01030006001 Vitis vinifera
HanXRQChr15g0488091 Helianthus annuus
Haze_13087 Corylus avellana
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla
HPP92_011117 Vanilla planifolia
HPP92_011122 Vanilla planifolia
Lalb_Chr01g0017281 Lupinus albus
Lj1P736T39 Lonicera japonica
Lj3g0000273 Lotus japonicus
Lj8P117T60 Lonicera japonica
Lsat_1_v5_gn_4_69460 Lactuca sativa
Lsat_1_v5_gn_5_187260 Lactuca sativa
Manes.12G083000 Manihot esculenta
Manes.13G151600 Manihot esculenta
MBI18_g19827_MAGBIO Magnolia biondii
MBI18_g45419_MAGBIO Magnolia biondii
MD09G1096400 Malus domestica
MD17G1084500 Malus domestica
Medtr3g013540 Medicago truncatula
MELO3C013535.2 Cucumis melo
Migut.H01020 Erythranthe guttata
MSTRG.14180 Avicennia marina
Nitab4.5_0001871g0070 Nicotiana tabacum
Nitab4.5_0002370g0070 Nicotiana tabacum
Nn1g03877 Nelumbo nucifera
Oeu003230.1 Olea europaea
Oeu018075.1 Olea europaea
Oeu025481.1 Olea europaea
Oeu029930.1 Olea europaea
Oeu035359.1 Olea europaea
Peaxi162Scf00007g00272 Petunia axillaris
PGR042G3565 Punica granatum
PGSC0003DMG400018371 Solanum tuberosum
Phvul.005G017100 Phaseolus vulgaris
Potri.013G147500 Populus trichocarpa
Potri.019G116200 Populus trichocarpa
Prupe.3G231100 Prunus persica
Psat5g185960 Pisum sativum
Psat5g223040 Pisum sativum
PSO210G4394 Papaver somniferum
PSO541G1576 Papaver somniferum
PSO675G8522 Papaver somniferum
PSO832G1174 Papaver somniferum
QL08p037311 Quercus lobata
RcHm_v2.0_Chr2g0161781 Rosa chinensis
Rhsim06G0152100 Rhododendron simsii
Sabra13G0119100 Salix brachista
Sabra19G0117200 Salix brachista
Sabra19G0136500 Salix brachista
SabraUnG0004200 Salix brachista
SalBow1G4632 Salvia bowleyana
Sc06g0009150 Simmondsia chinensis
Sed0007067 Sechium edule
Sed0009175 Sechium edule
SGA_v2.0_scaffold159G37625 Striga asiatica
SGA_v2.0_scaffold49G18304 Striga asiatica
Solyc07g054690.1 Solanum lycopersicum
Sopen07g028590 Solanum pennellii
Sp7g26190 Schrenkiella parvula
TAR626G1919 Trochodendron aralioides
TAR627G1051 Trochodendron aralioides
TAR629G2656 Trochodendron aralioides
THA.LOC104804065 Tarenaya hassleriana
Thecc.02G171600 Theobroma cacao
Thhalv10025277m.g Eutrema salsugineum
TPR.G1458 Trifolium pratense
TWI18G0136 Tripterygium wilfordii
TWI36G1326 Tripterygium wilfordii
TWI75G1119 Tripterygium wilfordii
unitig_52.g17339 Utricularia gibba
unitig_62.g23190 Utricularia gibba
unitig_62.g23192 Utricularia gibba
VMungo1080G0900 Vigna mungo

User provided reference genes

Program Settings