Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p69000 Brassica napus
Aa31LG1G10590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis
Actinidia07981 Actinidia chinensis
Actinidia20216 Actinidia chinensis
Actinidia20260 Actinidia chinensis
Ah.05g179300 Amaranthus hybridus
AL1G11260 Arabidopsis lyrata
Aqoxy5G04315 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea
AT1G01220 Arabidopsis thaliana
ATR0757G210 Amborella trichopoda
Atru.chr5.713 Acer truncatum
AUR62004524 Chenopodium quinoa
AUR62022731 Chenopodium quinoa
BcaC07g42430 Brassica carinata
BcaC07g42431 Brassica carinata
BolC8t52871H Brassica oleracea
BraA09t42237Z Brassica rapa
C08p53570 Brassica napus
CAN.G1415.13 Capsicum annuum
CARHR001250 Cardamine hirsuta
Carub.0008s1137 Capsella rubella
Ca_09524_v3 Cicer arietinum L.
CBR_g42133 Chara braunii
Cc02_g39660 Coffea canephora
Cfa003773 Carpinus fangiana
Ciclev10018702m.g Citrus clementina
CiPaw.02G042200 Carya illinoinensis
ClCG05G000660 Citrullus lanatus
COL.COLO4_06242 Corchorus olitorius
Cpa.g.sc139.7 Carica papaya
CsaV3_3G007870 Cucumis sativus L.
CSS0018706 Camellia sinensis var. sinensis
CSS0027474 Camellia sinensis var. sinensis
CSS0029053 Camellia sinensis var. sinensis
CSS0033565 Camellia sinensis var. sinensis
CSS0040683 Camellia sinensis var. sinensis
DCAR_006981 Daucus carota
Dinv34229 Davidia involucrata
Duzib138G0057 Durio zibethinus
ECA236G2333 Erigeron canadensis
EL10Ac1g00230 Beta vulgaris
Eucgr.E03445 Eucalyptus grandis
FAN01G0442 Fragaria x ananassa
FAN03G0670 Fragaria x ananassa
FAN06G3842 Fragaria x ananassa
FAN06G4481 Fragaria x ananassa
FAN10G2644 Fragaria x ananassa
FAN10G4300 Fragaria x ananassa
FvH4_7g17030 Fragaria vesca
Glyma.03G259000 Glycine max
Glyma.19G257700 Glycine max
Gohir.A12G113700 Gossypium hirsutum
Gohir.A12G113750 Gossypium hirsutum
Gohir.D12G117200 Gossypium hirsutum
Gorai.008G127000 Gossypium raimondii
GSVIVG01027188001 Vitis vinifera
GSVIVG01037616001 Vitis vinifera
HanXRQChr04g0120411 Helianthus annuus
Haze_15687 Corylus avellana
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla
HPP92_015094 Vanilla planifolia
Hund27175 Selenicereus undatus
Lalb_Chr04g0261441 Lupinus albus
Lj1g0006712 Lotus japonicus
Lj1g0017915 Lotus japonicus
Lj7C496T17 Lonicera japonica
Lsat_1_v5_gn_7_2761 Lactuca sativa
Manes.01G243600 Manihot esculenta
Mapoly0065s0064 Marchantia polymorpha
MBI12_g20265_MAGBIO Magnolia biondii
MCO11G284 Micromonas commoda
MD01G1085000 Malus domestica
MD07G1153800 Malus domestica
Medtr7g117870 Medicago truncatula
MELO3C006005.2 Cucumis melo
Migut.B01889 Erythranthe guttata
Nitab4.5_0000307g0050 Nicotiana tabacum
Nitab4.5_0006770g0030 Nicotiana tabacum
Nn1g00347 Nelumbo nucifera
Oeu007875.1 Olea europaea
Os03g0115100 Oryza sativa ssp. japonica
Peaxi162Scf00345g00024 Petunia axillaris
PGR102G0287 Punica granatum
PGSC0003DMG400000238 Solanum tuberosum
Phvul.006G115200 Phaseolus vulgaris
Potri.014G101400 Populus trichocarpa
Pp3c27_4880 Physcomitrium patens
Prupe.2G192700 Prunus persica
Psat3g001600 Pisum sativum
PSO063G5968 Papaver somniferum
PSO782G0220 Papaver somniferum
QL08p046032 Quercus lobata
RcHm_v2.0_Chr1g0360431 Rosa chinensis
Rhsim07G0002300 Rhododendron simsii
Sabra14G0074600 Salix brachista
SalBow3G3533 Salvia bowleyana
Sc13g0006630 Simmondsia chinensis
Sed0002059 Sechium edule
Sed0010112 Sechium edule
SEGI_19319 Sequoiadendron giganteum
SEGI_36326 Sequoiadendron giganteum
SEGI_38786 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09958 Striga asiatica
SHI13064 Sapria himalayana
SMO361G0266 Selaginella moellendorffii
Solyc01g096160.4 Solanum lycopersicum
Sopen01g039890 Solanum pennellii
Sopen01g039900 Solanum pennellii
Sp1g01070 Schrenkiella parvula
TAR629G2477 Trochodendron aralioides
THA.LOC104815884 Tarenaya hassleriana
Thecc.01G338700 Theobroma cacao
Thhalv10006637m.g Eutrema salsugineum
TPR.G4756 Trifolium pratense
TWI23G0835 Tripterygium wilfordii
unitig_899.g14792 Utricularia gibba
vmacro04289 Vaccinium macrocarpon
VMungo0540G0548 Vigna mungo
VMungo0720G2246 Vigna mungo
Zm00001eb001000 Zea mays

User provided reference genes

Program Settings